RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TLDC1Q6P9B6 456 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 RPS27LQ71UM5 84 aaKnown RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 CACNA2D3Q8IZS8 1091 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 NLGN4XQ8N0W4 816 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 ARHGEF39Q8N4T4 335 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 CSNK1A1LQ8N752 337 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 ZNF781Q8N8C0 355 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 ANKRD53Q8N9V6 530 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 MFSD9Q8NBP5 474 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 CCDC197Q8NCU1 140 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 ZNF248Q8NDW4 579 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 NLGN4YQ8NFZ3 816 aaPredicted RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 KCNE4Q8WWG9 221 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 NKD1Q969G9 470 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 UBE2E3Q969T4 207 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 REPS1Q96D71 796 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 WDR34Q96EX3 536 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 LRFN5Q96NI6 719 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 SLC29A3Q9BZD2 475 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 PITHD1Q9GZP4 211 aaPredicted RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 AKIRIN1Q9H9L7 192 aaPredicted RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 GEMIN8Q9NWZ8 242 aaKnown RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 SNX6Q9UNH7 406 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 ARL2BPQ9Y2Y0 163 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 USH1CQ9Y6N9 552 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 AP1M2Q9Y6Q5 423 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 LAMA5O15230 3695 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 OR1F1O43749 312 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 KRT6AP02538 564 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 KRT6BP04259 564 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 ALOX15P16050 662 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 KRT6CP48668 564 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 ARFIP2P53365 341 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 SNRPNP63162 240 aaKnown RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 IRX1P78414 480 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 CHIT1Q13231 466 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 SRSF6Q13247 344 aaKnown RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 DOC2AQ14183 400 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 SLBPQ14493 270 aaKnown RBP eCLIP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 GRM7Q14831 915 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 XKR6Q5GH73 641 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 CES4AQ5XG92 561 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 KANK2Q63ZY3 851 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 ZNF385CQ66K41 422 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 RHBDD2Q6NTF9 364 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 C6orf15Q6UXA7 325 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 RNF165Q6ZSG1 346 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 DSELQ8IZU8 1212 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 DTWD1Q8N5C7 304 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 TBC1D19Q8N5T2 526 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 L3MBTL4Q8NA19 623 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 TTC29Q8NA56 475 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 METTL6Q8TCB7 284 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 RERGQ96A58 199 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 CLIP3Q96DZ5 547 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 TM4SF19Q96DZ7 209 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 MOCOSQ96EN8 888 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 PTCD3Q96EY7 689 aaKnown RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 C10orf90Q96M02 699 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 NSUN5Q96P11 429 aaKnown RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 MACROD1Q9BQ69 325 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 AIF1LQ9BQI0 150 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 EFCAB11Q9BUY7 163 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 SLC7A5P2Q9GIP4 190 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 ZNF395Q9H8N7 513 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 ZBTB26Q9HCK0 441 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 NPHS2Q9NP85 383 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 LHX9Q9NQ69 397 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 ACSS2Q9NR19 701 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 PNPOQ9NVS9 261 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 DHCR7Q9UBM7 475 aaKnown RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 ZDHHC2Q9UIJ5 367 aa11.01□□□□□ -0.65
PFDN1-201ENST00000261813 RUVBL1Q9Y265 456 aaKnown RBP11.01□□□□□ -0.65
PFDN1-201ENST00000261813 HEATR5BQ9P2D3 2071 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 CELSR3Q9NYQ7 3312 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 HYKKA2RU49 373 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 MEN1O00255 615 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 UBFD1O14562 309 aaKnown RBP11□□□□□ -0.65
PFDN1-201ENST00000261813 OR7A17O14581 309 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 HBQ1P09105 142 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 KITP10721 976 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 PCSK2P16519 638 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 ITGAXP20702 1163 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 HMOX2P30519 316 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 ARRB2P32121 409 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 AQP5P55064 265 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 PHEXP78562 749 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 RBBP5Q15291 538 aaKnown RBP11□□□□□ -0.65
PFDN1-201ENST00000261813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11□□□□□ -0.65
PFDN1-201ENST00000261813 C1orf189Q5VU69 101 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 METTL21CQ5VZV1 264 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 ADNP2Q6IQ32 1131 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 LCN10Q6JVE6 187 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 FAM199XQ6PEV8 388 aaPredicted RBP11□□□□□ -0.65
PFDN1-201ENST00000261813 ZNF517Q6ZMY9 492 aaPredicted RBP11□□□□□ -0.65
PFDN1-201ENST00000261813 ACAD11Q709F0 780 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 SYVN1Q86TM6 617 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 ASPGQ86U10 573 aa11□□□□□ -0.65
PFDN1-201ENST00000261813 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms