RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SIKE1Q9BRV8 207 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 SORBS1Q9BX66 1292 aaKnown RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 NSRP1Q9H0G5 558 aaKnown RBP15.03■□□□□ -0
CCDC90B-201ENST00000260054 LRTM1Q9HBL6 345 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 KLHL14Q9P2G3 628 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 PISDQ9UG56 409 aa15.03■□□□□ -0
CCDC90B-201ENST00000260054 URADA6NGE7 173 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 ZNF749O43361 778 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 RAP1GDS1P52306 607 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 AP5B1Q2VPB7 878 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 GALNTL6Q49A17 601 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 ATP6AP1LQ52LC2 224 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 RFTN2Q52LD8 501 aaPredicted RBP15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 C6orf136Q5SQH8 315 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 PWWP2BQ6NUJ5 590 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 TRIM40Q6P9F5 258 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 COMMD6Q7Z4G1 85 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 BPHLQ86WA6 291 aaPredicted RBP15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 METTL4Q8N3J2 472 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 GALNT15Q8N3T1 639 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 C1orf52Q8N6N3 182 aaKnown RBP15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 TTC29Q8NA56 475 aaPredicted RBP15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 WDR36Q8NI36 951 aaKnown RBP15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 RGMAQ96B86 450 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 C11orf24Q96F05 449 aaPredicted RBP15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 TEFMQ96QE5 360 aaKnown RBP15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 TMEM120AQ9BXJ8 343 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 CUTCQ9NTM9 273 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 NMRK1Q9NWW6 199 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 C1orf109Q9NX04 203 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 SLC39A1Q9NY26 324 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 SATB2Q9UPW6 733 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 SLC22A7Q9Y694 548 aa15.02□□□□□ -0.01
CCDC90B-201ENST00000260054 PTPRBP23467 1997 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 FOXS1O43638 330 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 SEC22BO75396 215 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 JMJD7P0C870 316 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 ALOX12P18054 663 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 IL1RNP18510 177 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 BSGP35613 385 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 MAPK10P53779 464 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 EMP3P54852 163 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 HNRNPH2P55795 449 aaKnown RBP15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 RPL38P63173 70 aaKnown RBP15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 LSM12Q3MHD2 195 aaKnown RBP15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 DEFB134Q4QY38 66 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 GARNL3Q5VVW2 1013 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 CYB5D1Q6P9G0 228 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 FOXR1Q6PIV2 292 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 ZNF793Q6ZN11 406 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 ABHD13Q7L211 337 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 SPATA21Q7Z572 469 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 ZFAND4Q86XD8 727 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 PDSS2Q86YH6 399 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 WDFY3Q8IZQ1 3526 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 AMER3Q8N944 861 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 ACTRT2Q8TDY3 377 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 C10orf82Q8WW14 230 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 PPP3R2Q96LZ3 170 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 KCNC2Q96PR1 638 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 CCT8L2Q96SF2 557 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 CENPKQ9BS16 269 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 PRDM7Q9NQW5 492 aa15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 DHCR7Q9UBM7 475 aaKnown RBP15.01□□□□□ -0.01
CCDC90B-201ENST00000260054 SNX3O60493 162 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 VPS4BO75351 444 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 EEDO75530 441 aaKnown RBP15□□□□□ -0.01
CCDC90B-201ENST00000260054 SCRG1O75711 98 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 GBAP04062 536 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 ARFIP2P53365 341 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 RAE1P78406 368 aaKnown RBP15□□□□□ -0.01
CCDC90B-201ENST00000260054 BTN3A2P78410 334 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 ACSM2AQ08AH3 577 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 NDUFA9Q16795 377 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 MUM1Q2TAK8 710 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 FAM214AQ32MH5 1076 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 LARP7Q4G0J3 582 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC90B-201ENST00000260054 SPIN4Q56A73 249 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 ACSM2BQ68CK6 577 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 NXNQ6DKJ4 435 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 OR4C11Q6IEV9 310 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 TTLL10Q6ZVT0 673 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 TMEM126BQ8IUX1 230 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 SRFBP1Q8NEF9 429 aaKnown RBP15□□□□□ -0.01
CCDC90B-201ENST00000260054 QRFPRQ96P65 431 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 TBCDQ9BTW9 1192 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 NDC1Q9BTX1 674 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 TCF7L2Q9NQB0 619 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 POLR3HQ9Y535 204 aaPredicted RBP15□□□□□ -0.01
CCDC90B-201ENST00000260054 B3GALT1Q9Y5Z6 326 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 A0A0A6YYC8 382 aaPredicted RBP15□□□□□ -0.01
CCDC90B-201ENST00000260054 I3L1I5 382 aaPredicted RBP15□□□□□ -0.01
CCDC90B-201ENST00000260054 GALR3O60755 368 aaPredicted RBP15□□□□□ -0.01
CCDC90B-201ENST00000260054 FAM107AO95990 144 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 ZNF28P17035 718 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 LBPP18428 481 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 SSR2P43308 183 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 ARFIP1P53367 373 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 RAB15P59190 212 aa15□□□□□ -0.01
CCDC90B-201ENST00000260054 TGM3Q08188 693 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms