RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 RAD50Q92878 1312 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 MYH6P13533 1939 aa4.38□□□□□ -1.71
TRA2B-201ENST00000259043 TMEM189-UBE2V1I3L0A0 370 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 HAS3O00219 553 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 SPRY1O43609 319 aaPredicted RBP4.37□□□□□ -1.71
TRA2B-201ENST00000259043 SURF6O75683 361 aaKnown RBP4.37□□□□□ -1.71
TRA2B-201ENST00000259043 SIX3O95343 332 aaPredicted RBP4.37□□□□□ -1.71
TRA2B-201ENST00000259043 CD48P09326 243 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 ATP6V1B1P15313 513 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 GNB3P16520 340 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 MSH3P20585 1137 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 CASTP20810 708 aaKnown RBP4.37□□□□□ -1.71
TRA2B-201ENST00000259043 TAF6P49848 677 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 LIMK1P53667 647 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 PMP22Q01453 160 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 UBE2V1Q13404 147 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 FAM198BQ6UWH4 519 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 PACS1Q6VY07 963 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 PPP1R21Q6ZMI0 780 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 C15orf39Q6ZRI6 1047 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 C11orf57Q6ZUT1 292 aaPredicted RBP4.37□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF534Q76KX8 674 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 LONP2Q86WA8 852 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 UNC45BQ8IWX7 931 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 CEP57L1Q8IYX8 460 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 MYOCDQ8IZQ8 938 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 NUP93Q8N1F7 819 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 GMCL1P1Q8NEA9 526 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 EXOC6Q8TAG9 804 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 ROBO4Q8WZ75 1007 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 TOP1MTQ969P6 601 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF558Q96NG5 402 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 LRRC3BQ96PB8 259 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 GPATCH1Q9BRR8 931 aaKnown RBP4.37□□□□□ -1.71
TRA2B-201ENST00000259043 DESI2Q9BSY9 194 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 ABHD6Q9BV23 337 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 MRPL9Q9BYD2 267 aaKnown RBP4.37□□□□□ -1.71
TRA2B-201ENST00000259043 FAM129AQ9BZQ8 928 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 ZBTB20Q9HC78 741 aaPredicted RBP4.37□□□□□ -1.71
TRA2B-201ENST00000259043 MTRRQ9UBK8 725 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 CLIP2Q9UDT6 1046 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 GRIP1Q9Y3R0 1128 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 MYO10Q9HD67 2058 aa4.37□□□□□ -1.71
TRA2B-201ENST00000259043 A0A087WV48 116 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 TEX13DA0A0J9YY54 714 aaPredicted RBP4.36□□□□□ -1.71
TRA2B-201ENST00000259043 HTR3EA5X5Y0 456 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 SLC22A2O15244 555 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 MED24O75448 989 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 MMP15P51511 669 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 ARHGAP1Q07960 439 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 PTK6Q13882 451 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 E2F5Q15329 346 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 VWC2Q2TAL6 325 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 SBK1Q52WX2 424 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 MOXD1Q6UVY6 613 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 ZBTB49Q6ZSB9 765 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 SPATA21Q7Z572 469 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 TIGD4Q8IY51 512 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 SIX6OS1Q8N1H7 587 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 SPEM1Q8N4L4 309 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 C1orf52Q8N6N3 182 aaKnown RBP4.36□□□□□ -1.71
TRA2B-201ENST00000259043 VN1R2Q8NFZ6 395 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 RDM1Q8NG50 284 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 ZNF473Q8WTR7 871 aaKnown RBP4.36□□□□□ -1.71
TRA2B-201ENST00000259043 KCNE4Q8WWG9 221 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 SUSD6Q92537 303 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 ARHGAP45Q92619 1136 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 OR6C1Q96RD1 312 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 APOBEC3GQ9HC16 384 aaKnown RBP4.36□□□□□ -1.71
TRA2B-201ENST00000259043 ADPRHL2Q9NX46 363 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 BARX2Q9UMQ3 279 aaPredicted RBP4.36□□□□□ -1.71
TRA2B-201ENST00000259043 SNX5Q9Y5X3 404 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 DENND4AQ7Z401 1863 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 ZZEF1O43149 2961 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 LOXHD1Q8IVV2 1947 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 ASPMQ8IZT6 3477 aa4.36□□□□□ -1.71
TRA2B-201ENST00000259043 FRYQ5TBA9 3013 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 GPR179Q6PRD1 2367 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 OR2M5A3KFT3 312 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 ANKUB1A6NFN9 424 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 OR6C76A6NM76 312 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 C15orf62A8K5M9 175 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 PRDM1O75626 825 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 GCNT3O95395 438 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 MMP1P03956 469 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 LIPFP07098 398 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 OR52Z1P0C646 297 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 IGHV4-38-2P0DP08 117 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 PDGFRAP16234 1089 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 PSMA3P25788 255 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 CDC25CP30307 473 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 CHRNB4P30926 498 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 GABRA5P31644 462 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 CTNNB1P35222 781 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 SLC9A3P48764 834 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 ACSM1Q08AH1 577 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 TUBB2AQ13885 445 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 C6orf136Q5SQH8 315 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 MPP7Q5T2T1 576 aa4.35□□□□□ -1.71
TRA2B-201ENST00000259043 RNASEH2BQ5TBB1 312 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms