RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PRAMEF14Q5SWL7 426 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 PRAMEF13Q5VWM6 474 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 TMEM53Q6P2H8 277 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 PNCKQ6P2M8 343 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 DOK4Q8TEW6 326 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 HTRA1Q92743 480 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 SLC35B4Q969S0 331 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 FUNDC2Q9BWH2 189 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 TPT1P8Q9HAU6 139 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 PSME2Q9UL46 239 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 FZD4Q9ULV1 537 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 PCDHGA8Q9Y5G5 932 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 C5orf67F2Z3F1 127 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 ARNTLO00327 626 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 QSOX1O00391 747 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 GSTT2P0CG29 244 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 GSTT2BP0CG30 244 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 RAP2AP10114 183 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 PRPS1L1P21108 318 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 TTKP33981 857 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 HOXD12P35452 270 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 CHI3L1P36222 383 aaPredicted RBP14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 PIGAP37287 484 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 ARSFP54793 590 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 BROXQ5VW32 411 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 SLCO4C1Q6ZQN7 724 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 CSGALNACT1Q8TDX6 532 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 SLC5A11Q8WWX8 675 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 BARD1Q99728 777 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 TOR3AQ9H497 397 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 NTN4Q9HB63 628 aa14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 RUVBL1Q9Y265 456 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-201ENST00000257604 ANKDD1BA6NHY2 528 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 NPC1O15118 1278 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ZNF24P17028 368 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 MAP2K4P45985 399 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 PRIM2P49643 509 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 SEPHS1P49903 392 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 PRKAG1P54619 331 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 LIPJQ5W064 366 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 LRRTM4Q86VH4 590 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 CNIH3Q8TBE1 160 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ZFP90Q8TF47 636 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 EXOSC8Q96B26 276 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 SH3GL1Q99961 368 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 UGT2B28Q9BY64 529 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ZDHHC5Q9C0B5 715 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 RIBC2Q9H4K1 309 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 RAD18Q9NS91 495 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 PCM1Q15154 2024 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 PRKRAO75569 313 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ETFAP13804 333 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 FCARP24071 287 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 TAS2R38P59533 333 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 VBP1P61758 197 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ZNF385BQ569K4 471 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ZNF362Q5T0B9 420 aaPredicted RBP14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 PIP5KL1Q5T9C9 394 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 FAM46CQ5VWP2 391 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 NIPAL1Q6NVV3 410 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 TMIGD1Q6UXZ0 262 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 WDR20Q8TBZ3 569 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ALOXE3Q9BYJ1 711 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 NEUROG3Q9Y4Z2 214 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 HOXB3P14651 431 aaPredicted RBP14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 AK4P27144 223 aaPredicted RBP14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 HSPB3Q12988 150 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 IRF4Q15306 451 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ITPRIPL2Q3MIP1 535 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 OLIG3Q7RTU3 272 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 DGLUCYQ7Z3D6 616 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 TMEM179BQ7Z7N9 219 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 C17orf64Q86WR6 236 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 ZDHHC21Q8IVQ6 265 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 NAGSQ8N159 534 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 TMIEQ8NEW7 156 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 VPS37AQ8NEZ2 397 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 OR8J3Q8NGG0 315 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 TRUB1Q8WWH5 349 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 RAD51AP1Q96B01 352 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 KCNH6Q9H252 994 aa14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 TMA7Q9Y2S6 64 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-201ENST00000257604 HTR3EA5X5Y0 456 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 CCDC85CA6NKD9 419 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 ERN1O75460 977 aaKnown RBP14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 IL3P08700 152 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 C1GALT1C1LP0DN25 315 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 FCGR1AP12314 374 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 HTR1BP28222 390 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 HYAL1Q12794 435 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 SLC13A2Q13183 592 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 GAB1Q13480 694 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 GBX1Q14549 363 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 DUOXA1Q1HG43 343 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 COX20Q5RI15 118 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 TNFAIP8L2Q6P589 184 aaPredicted RBP14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 USP51Q70EK9 711 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 GPR149Q86SP6 731 aa14.03□□□□□ -0.16
TRAFD1-201ENST00000257604 SPARTQ8N0X7 666 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms