RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 NUDT13Q86X67 352 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 CRYBG2Q8N1P7 616 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 GTPBP8Q8N3Z3 284 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 FBXO15Q8NCQ5 510 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ETNPPLQ8TBG4 499 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 C14orf79Q96F83 325 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC2A11Q9BYW1 496 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ULBP1Q9BZM6 244 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ZDHHC5Q9C0B5 715 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PRO1933Q9H354 126 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 REEP1Q9H902 201 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ADARB2Q9NS39 739 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 IL17BQ9UHF5 180 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MAGEL2Q9UJ55 1249 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC6A5Q9Y345 797 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 PCDHGB5Q9Y5G0 923 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 LRIT2A6NDA9 550 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MED7O43513 233 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 NR2F6P10588 404 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SOX9P48436 509 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ACTR1AP61163 376 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 RRAS2P62070 204 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 AIMP2Q13155 320 aaKnown RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 MAD2L1Q13257 205 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 KCNC3Q14003 757 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 RABL3Q5HYI8 236 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 LCLAT1Q6UWP7 414 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 QSOX2Q6ZRP7 698 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 WDR53Q7Z5U6 358 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF383Q8NA42 475 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 L3HYPDHQ96EM0 354 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 ADAM19Q9H013 955 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 HEBP1Q9NRV9 189 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 BABAM2Q9NXR7 383 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 TREM2Q9NZC2 230 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 DTLQ9NZJ0 730 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 COL20A1Q9P218 1284 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC13A4Q9UKG4 626 aa6.54□□□□□ -1.36
PDGFRA-201ENST00000257290 SOCS7O14512 581 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 TULP3O75386 442 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SCGB2A1O75556 95 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF682O95780 498 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RPN2P04844 631 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CHRNB2P17787 502 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CLCN4P51793 760 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PER3P56645 1201 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SNRPFP62306 86 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CNTN1Q12860 1018 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 TAF1AQ15573 450 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SPPL2CQ8IUH8 684 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ZZZ3Q8IYH5 903 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PARP16Q8N5Y8 322 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 C1GALT1C1Q96EU7 318 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RDH12Q96NR8 316 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 LENG8Q96PV6 779 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 KCNJ15Q99712 375 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 JPH1Q9HDC5 661 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ASCL3Q9NQ33 180 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RCOR3Q9P2K3 495 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 USP18Q9UMW8 372 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 OAZ3Q9UMX2 235 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CNTNAP1P78357 1384 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 A0A1W2PPM1 405 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 DDTLA6NHG4 134 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CAPN5O15484 640 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 STAG3L2P0CL84 134 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 TPH1P17752 444 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 KDELR1P24390 212 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 IGFBP5P24593 272 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 GLP1RP43220 463 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 GSK3AP49840 483 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RANP62826 216 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 PSPHP78330 225 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF470Q6ECI4 717 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC27A4Q6P1M0 643 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 GCNT7Q6ZNI0 430 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 C7orf34Q96L11 122 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 FYTTD1Q96QD9 318 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MTERF1Q99551 399 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 FBRSQ9HAH7 460 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 IL17RBQ9NRM6 502 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM118AQ9NWS6 357 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 FBXL2Q9UKC9 423 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC39A10Q9ULF5 831 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RPTORQ8N122 1335 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 USP54Q70EL1 1684 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 HPGDSO60760 199 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF821O75541 412 aaPredicted RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 GADD45GO95257 159 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MT-CO2P00403 227 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 NME1P15531 152 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 HDCP19113 662 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 CBLP22681 906 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 AHCYP23526 432 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 ITPKAP23677 461 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 APEX1P27695 318 aaKnown RBP6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 RFC3P40938 356 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 MXD1Q05195 221 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 IRAK1BP1Q5VVH5 260 aa6.53□□□□□ -1.36
PDGFRA-201ENST00000257290 APOBEC3HQ6NTF7 200 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms