RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 OR4D2P58180 307 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 UBE2IP63279 158 aaKnown RBP18.05■□□□□ 0.48
TRIM47-201ENST00000254816 C2orf80Q0P641 193 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 ZNF385BQ569K4 471 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 RUNDC3AQ59EK9 446 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 SPPL2CQ8IUH8 684 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 TMEM132CQ8N3T6 1108 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 FLVCR1-AS1Q8TAF5 88 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 FAM174AQ8TBP5 190 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 DUSP26Q9BV47 211 aa18.05■□□□□ 0.48
TRIM47-201ENST00000254816 PITHD1Q9GZP4 211 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-201ENST00000254816 TRBV5-3A0A0A0MS03 114 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 GSAPA4D1B5 854 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 RFXANKO14593 260 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 CPSF4O95639 269 aaKnown RBP18.04■□□□□ 0.48
TRIM47-201ENST00000254816 PTPN6P29350 595 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 HPCAL1P37235 193 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 C21orf58P58505 322 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 MYBPC1Q00872 1141 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 DPY19L1Q2PZI1 675 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 CCNYL2Q5T2Q4 361 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 CPTPQ5TA50 214 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 PRR23BQ6ZRT6 265 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 SATL1Q86VE3 508 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 OR8J2Q8NGG1 315 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 ZDHHC1Q8WTX9 485 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 NELL1Q92832 810 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 FCRL4Q96PJ5 515 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 KLHL25Q9H0H3 589 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 KLHL31Q9H511 634 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 POT1Q9NUX5 634 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 SCN3AQ9NY46 2000 aa18.04■□□□□ 0.48
TRIM47-201ENST00000254816 A0A096LPI6 279 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 ARPC2O15144 300 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 NDUFS4O43181 175 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 CCNDBP1O95273 360 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 CSF2P04141 144 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 PCSK2P16519 638 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 BSGP35613 385 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 LRIF1Q5T3J3 769 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 ZNF425Q6IV72 752 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 DCP2Q8IU60 420 aaKnown RBP18.03■□□□□ 0.48
TRIM47-201ENST00000254816 AMER3Q8N944 861 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 OR8J3Q8NGG0 315 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 OR2A14Q96R47 310 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 PANX1Q96RD7 426 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 SLC29A1Q99808 456 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 LHX9Q9NQ69 397 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 AHSPQ9NZD4 102 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 AURKCQ9UQB9 309 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 MUC3AQ02505 3323 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 ERN1O75460 977 aaKnown RBP18.03■□□□□ 0.48
TRIM47-201ENST00000254816 IL3P08700 152 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 UGT2B7P16662 529 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 HOXB9P17482 250 aaPredicted RBP18.03■□□□□ 0.48
TRIM47-201ENST00000254816 PLA2G16P53816 162 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 BNIP2Q12982 314 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 PRSS53Q2L4Q9 553 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 CNPY1Q3B7I2 92 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 UBE3DQ7Z6J8 389 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 C10orf111Q8N326 155 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 OR10A6Q8NH74 314 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 LMX1AQ8TE12 382 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 PCED1AQ9H1Q7 454 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 REEP4Q9H6H4 257 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 ACTR10Q9NZ32 417 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 TMEM131Q92545 1883 aa18.03■□□□□ 0.48
TRIM47-201ENST00000254816 KIR2DS5A0A0G2JLQ3 304 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 A0A0G2JNG1 304 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 KIR2DS3K7RE56 304 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 CLEC3AO75596 197 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 FESP07332 822 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 MAGP20916 626 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 SERPINB1P30740 379 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 CSNK1EP49674 416 aaKnown RBP18.02■□□□□ 0.48
TRIM47-201ENST00000254816 KIR2DS5Q14953 304 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 DUOXA1Q1HG43 343 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 FAM71E1Q6IPT2 247 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 FAM180BQ6P0A1 224 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 C1orf216Q8TAB5 229 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 DUS3LQ96G46 650 aaKnown RBP18.02■□□□□ 0.48
TRIM47-201ENST00000254816 ZNF583Q96ND8 569 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 MYNNQ9NPC7 610 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 SPASTQ9UBP0 616 aa18.02■□□□□ 0.48
TRIM47-201ENST00000254816 LRIT2A6NDA9 550 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 C4orf51C9J302 202 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 TPST1O60507 370 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 OR6B1O95007 311 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 SEMA3DO95025 777 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 FURINP09958 794 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 NME1P15531 152 aaKnown RBP18.02■□□□□ 0.47
TRIM47-201ENST00000254816 CKMT2P17540 419 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 HSPA13P48723 471 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 HHEXQ03014 270 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 HYAL2Q12891 473 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 SLC14A1Q13336 389 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 KIR2DS3Q14952 304 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 CWF19L1Q69YN2 538 aaKnown RBP18.02■□□□□ 0.47
TRIM47-201ENST00000254816 PAQR7Q86WK9 346 aa18.02■□□□□ 0.47
TRIM47-201ENST00000254816 STARD8Q92502 1023 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms