RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TBCCD1Q9NVR7 557 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 SERPIND1P05546 499 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 IL3P08700 152 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 OCM2P0CE71 109 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 OCMP0CE72 109 aaPredicted RBP15.11■□□□□ 0.01
LRFN1-201ENST00000248668 CD247P20963 164 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 BROXQ5VW32 411 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 HIPK1Q86Z02 1210 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 SLC44A2Q8IWA5 706 aaPredicted RBP15.11■□□□□ 0.01
LRFN1-201ENST00000248668 ZFP90Q8TF47 636 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 PPCDCQ96CD2 204 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 ASPSCR1Q9BZE9 553 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 LHPPQ9H008 270 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 MBNL1Q9NR56 388 aaKnown RBP15.11■□□□□ 0.01
LRFN1-201ENST00000248668 GPATCH2Q9NW75 528 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 TESMINQ9Y4I5 508 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 SERTM1A2A2V5 107 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 OXSR1O95747 527 aaPredicted RBP15.11■□□□□ 0.01
LRFN1-201ENST00000248668 PAK4O96013 591 aaPredicted RBP15.11■□□□□ 0.01
LRFN1-201ENST00000248668 OPRD1P41143 372 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 RAD23AP54725 363 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 SMN1Q16637 294 aaKnown RBP15.11■□□□□ 0.01
LRFN1-201ENST00000248668 MPEG1Q2M385 716 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 OR52E4Q8NGH9 312 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 OR2L2Q8NH16 312 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 C16orf78Q8WTQ4 265 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 SGPP1Q9BX95 441 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 PLA2G2FQ9BZM2 168 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 ABCG4Q9H172 646 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 REEP4Q9H6H4 257 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 SIRT5Q9NXA8 310 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 RPS6KA6Q9UK32 745 aa15.11■□□□□ 0.01
LRFN1-201ENST00000248668 C1orf226A1L170 272 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 RFXAPO00287 272 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 HTR1AP08908 422 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 HSD3B1P14060 373 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 HSD3B2P26439 372 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 ACADLP28330 430 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 GJA4P35212 333 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 ARHGDIAP52565 204 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 RPS26P62854 115 aaKnown RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 PAGE2BQ5JRK9 111 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 TMIGD1Q6UXZ0 262 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 Q6ZPB1 254 aaPredicted RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 MSANTD1Q6ZTZ1 278 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 ADCK2Q7Z695 626 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 ZC3H7AQ8IWR0 971 aaKnown RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 PJA1Q8NG27 643 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 HCAR2Q8TDS4 363 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 GANCQ8TET4 914 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 EFCAB11Q9BUY7 163 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 PAK1IP1Q9NWT1 392 aaPredicted RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 TRIOO75962 3097 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 J3QRK9 145 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 CHI3L1P36222 383 aaPredicted RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 MAGEA2P43356 314 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 WSCD2Q2TBF2 565 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 SHQ1Q6PI26 577 aaKnown RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 VITQ6UXI7 678 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 RNF130Q86XS8 419 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 SYNPOQ8N3V7 929 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 NFKBIDQ8NI38 313 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 REPS1Q96D71 796 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 COX4I2Q96KJ9 171 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 F2RL3Q96RI0 385 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 SLC6A17Q9H1V8 727 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 OR52A5Q9H2C5 316 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 XKR8Q9H6D3 395 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 USE1Q9NZ43 259 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 A0A1W2PP55 124 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 C1QTNF3-AMACRE9PGA6 284 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 H7BY64 318 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 SUV39H1O43463 412 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 KAT7O95251 611 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 CLCNKAP51800 687 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 ISL1P61371 349 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 CBLL1Q75N03 491 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 EIF3MQ7L2H7 374 aaKnown RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 RTL10Q7L3V2 364 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 LRRC56Q8IYG6 542 aaPredicted RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 PRAP1Q96NZ9 151 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 ITM2CQ9NQX7 267 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 THUMPD1Q9NXG2 353 aaKnown RBP15.1■□□□□ 0.01
LRFN1-201ENST00000248668 RWDD3Q9Y3V2 267 aa15.1■□□□□ 0.01
LRFN1-201ENST00000248668 CCDC88CQ9P219 2028 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 C5orf67F2Z3F1 127 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 VCANP13611 3396 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 ACP5P13686 325 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 PDGFRLQ15198 375 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 PIP5KL1Q5T9C9 394 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 ANXA8L1Q5VT79 327 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 XAF1Q6GPH4 301 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 VN1R5Q7Z5H4 357 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 SPARTQ8N0X7 666 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 PIK3C3Q8NEB9 887 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 PHOSPHO2Q8TCD6 241 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 ADAMTS16Q8TE57 1224 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 EPHX3Q9H6B9 360 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 REEP1Q9H902 201 aa15.09■□□□□ 0.01
LRFN1-201ENST00000248668 MIEF1Q9NQG6 463 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms