RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 RABL2BQ9UNT1 228 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 LOC730098B7Z3J9 87 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 L7N2F9 121 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 ALPPL2P10696 532 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 DCKP27707 260 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 VAMP2P63027 116 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 PRKCDQ05655 676 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 TRAM2Q15035 370 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 ATG9BQ674R7 924 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 PROM1O43490 865 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 HFE2Q6ZVN8 426 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 SLC44A3Q8N4M1 653 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 ADAD1Q96M93 576 aaKnown RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 SLC28A3Q9HAS3 691 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 Q9N2J8 555 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 LAMP5Q9UJQ1 280 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 HSPB11Q9Y547 144 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 FXYD6-FXYD2A0A087WZ82 144 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 TPD52L2O43399 206 aaKnown RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 PRKCGP05129 697 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 CSN2P05814 226 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 RPS3AP61247 264 aaKnown RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 MYLK3Q32MK0 819 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 PTCHD3Q3KNS1 767 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 IGDCC3Q8IVU1 814 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 TIGD4Q8IY51 512 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 CENPSQ8N2Z9 138 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 MARVELD2Q8N4S9 558 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 FXYD6Q9H0Q3 95 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 DNAJC27Q9NZQ0 273 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 RNF11Q9Y3C5 154 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 PCDHGA2Q9Y5H1 932 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 STYXL1Q9Y6J8 313 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 CKAP5Q14008 2032 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 A0A096LPI6 279 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 KDELR3O43731 214 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 RP2O75695 350 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 ACTR1BP42025 376 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 ACTR1AP61163 376 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 RAB39AQ14964 217 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 SEC23BQ15437 767 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 FAM76BQ5HYJ3 339 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 FANK1Q8TC84 345 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 RANBP3Q9H6Z4 567 aaPredicted RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 PNO1Q9NRX1 252 aaKnown RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 ZFC3H1O60293 1989 aaKnown RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 PRAMEF11O60813 436 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 MATN1P21941 496 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 GRK5P34947 590 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 PLEKHS1Q5SXH7 462 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 XKR5Q6UX68 686 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 SLC25A36Q96CQ1 311 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 BARD1Q99728 777 aaKnown RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 TM9SF2Q99805 663 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 CCDC106Q9BWC9 280 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 J3QLW9 94 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 SOX14O95416 240 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 ZNF19P17023 458 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 PPP1R8Q12972 351 aaKnown RBP11.09□□□□□ -0.63
NIN-201ENST00000245441 LIPJQ5W064 366 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 ZNF384Q8TF68 577 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 CACNG4Q9UBN1 327 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 SCN2AQ99250 2005 aa11.09□□□□□ -0.63
NIN-201ENST00000245441 TCEA1P23193 301 aaKnown RBP11.08□□□□□ -0.63
NIN-201ENST00000245441 LEPRP48357 1165 aaKnown RBP11.08□□□□□ -0.63
NIN-201ENST00000245441 ZNF783Q6ZMS7 281 aa11.08□□□□□ -0.63
NIN-201ENST00000245441 ZSWIM9Q86XI8 627 aa11.08□□□□□ -0.63
NIN-201ENST00000245441 ADAM7Q9H2U9 754 aa11.08□□□□□ -0.63
NIN-201ENST00000245441 PREBQ9HCU5 417 aa11.08□□□□□ -0.63
NIN-201ENST00000245441 CCM2LQ9NUG4 571 aaPredicted RBP11.08□□□□□ -0.63
NIN-201ENST00000245441 SLC45A1Q9Y2W3 748 aa11.08□□□□□ -0.63
NIN-201ENST00000245441 EXOSC1Q9Y3B2 195 aaKnown RBP11.08□□□□□ -0.63
NIN-201ENST00000245441 LRRN3E7EW58 273 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 ACVRL1P37023 503 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 C6orf136Q5SQH8 315 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 CEP97Q8IW35 865 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 LRRN3Q9H3W5 708 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 E7ESA3 106 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 NPIPA5E9PKD4 350 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 NCEH1Q6PIU2 408 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 CHRDL2Q6WN34 429 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 DCAF4L2Q8NA75 395 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 LRCH3Q96II8 777 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 TSGA13Q96PP4 275 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 NPIPA1Q9UND3 350 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 PLCL2Q9UPR0 1127 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 TJP1Q07157 1748 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 DFNA5O60443 496 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 BTN3A2P78410 334 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 SHQ1Q6PI26 577 aaKnown RBP11.08□□□□□ -0.64
NIN-201ENST00000245441 MMAAQ8IVH4 418 aaKnown RBP11.08□□□□□ -0.64
NIN-201ENST00000245441 NEIL3Q8TAT5 605 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 IRF2BPLQ9H1B7 796 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 GDF5P43026 501 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 Q6ZVU0 165 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 SNX29P2Q8IUI4 249 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 OR9A1PQ8NGU1 263 aa11.08□□□□□ -0.64
NIN-201ENST00000245441 TFGQ92734 400 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms