RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CCDC177Q9NQR7 707 aaPredicted RBP21.03■□□□□ 0.96
RNF39-201ENST00000244360 DGKBQ9Y6T7 804 aa21.03■□□□□ 0.96
RNF39-201ENST00000244360 NUP214P35658 2090 aaPredicted RBP21.03■□□□□ 0.96
RNF39-201ENST00000244360 BOLA2-SMG1P6H3BVE0 249 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 JRKO75564 520 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 PIK3CBP42338 1070 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 ITGA1P56199 1179 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 NFE2L1Q14494 772 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 HIST2H2ACQ16777 129 aaPredicted RBP21.02■□□□□ 0.96
RNF39-201ENST00000244360 DGUOKQ16854 277 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 IQCCQ4KMZ1 466 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 HIST2H2AA3Q6FI13 130 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 TMC5Q6UXY8 1006 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 FAM83HQ6ZRV2 1179 aaPredicted RBP21.02■□□□□ 0.96
RNF39-201ENST00000244360 B3GNT8Q7Z7M8 397 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 SLCO6A1Q86UG4 719 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 SETD7Q8WTS6 366 aaKnown RBP21.02■□□□□ 0.96
RNF39-201ENST00000244360 ITPKCQ96DU7 683 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 COX14Q96I36 57 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 HDAC8Q9BY41 377 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 ASPSCR1Q9BZE9 553 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 AKIP1Q9NQ31 210 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 DYRK4Q9NR20 520 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 GMPPBQ9Y5P6 360 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 COL4A3Q01955 1670 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 NUDT7P0C024 238 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 MYOGP15173 224 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 CDH3P22223 829 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 ACVR2AP27037 513 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 SYT6Q5T7P8 510 aaPredicted RBP21.02■□□□□ 0.96
RNF39-201ENST00000244360 EGFLAMQ63HQ2 1017 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 ADAMTSL4Q6UY14 1074 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 ZBTB46Q86UZ6 589 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 HORMAD1Q86X24 394 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 OR4A15Q8NGL6 344 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 YIPF6Q96EC8 236 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 SPNS1Q9H2V7 528 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 MYNNQ9NPC7 610 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 GIN1Q9NXP7 522 aa21.02■□□□□ 0.96
RNF39-201ENST00000244360 hCG_2039718K7EN88 272 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 M0R3G1 203 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 XPNPEP2O43895 674 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 MITFO75030 526 aaPredicted RBP21.01■□□□□ 0.95
RNF39-201ENST00000244360 KLHL18O94889 574 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 GRK3P35626 688 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 P2RY2P41231 377 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 CLK3P49761 638 aaKnown RBP21.01■□□□□ 0.95
RNF39-201ENST00000244360 DAPP51397 102 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 MVDP53602 400 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 NPTX1Q15818 432 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 TRIM16LQ309B1 348 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 UBE2Q1Q7Z7E8 422 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 GALNT5Q7Z7M9 940 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 PDZD3Q86UT5 571 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 METTL4Q8N3J2 472 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 LMNTD1Q8N9Z9 388 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 RAB7BQ96AH8 199 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 EXD2Q9NVH0 621 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 ATAD3AQ9NVI7 634 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 SH3BP4Q9P0V3 963 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 ERVK-18Q9QC07 812 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 PCDHGA10Q9Y5H3 936 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 PCYT1BQ9Y5K3 369 aaPredicted RBP21.01■□□□□ 0.95
RNF39-201ENST00000244360 PI15O43692 258 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 FURINP09958 794 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 IDUAP35475 653 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 RPL3P39023 403 aaKnown RBP21.01■□□□□ 0.95
RNF39-201ENST00000244360 RPA4Q13156 261 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 CBX3Q13185 183 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 DSG4Q86SJ6 1040 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 P2RY8Q86VZ1 359 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 CXorf40AQ8TE69 158 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 UBE2E3Q969T4 207 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 C7orf34Q96L11 122 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 MROQ9BYG7 248 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 SELENONQ9NZV5 590 aa21.01■□□□□ 0.95
RNF39-201ENST00000244360 ST13P50502 369 aaKnown RBP21■□□□□ 0.95
RNF39-201ENST00000244360 TSTA3Q13630 321 aaPredicted RBP21■□□□□ 0.95
RNF39-201ENST00000244360 PDGFRLQ15198 375 aa21■□□□□ 0.95
RNF39-201ENST00000244360 FAM71E1Q6IPT2 247 aa21■□□□□ 0.95
RNF39-201ENST00000244360 LCTLQ6UWM7 567 aa21■□□□□ 0.95
RNF39-201ENST00000244360 TRIM73Q86UV7 250 aa21■□□□□ 0.95
RNF39-201ENST00000244360 TSPYL5Q86VY4 417 aaPredicted RBP21■□□□□ 0.95
RNF39-201ENST00000244360 MMAAQ8IVH4 418 aaKnown RBP21■□□□□ 0.95
RNF39-201ENST00000244360 WDR48Q8TAF3 677 aa21■□□□□ 0.95
RNF39-201ENST00000244360 C16orf78Q8WTQ4 265 aa21■□□□□ 0.95
RNF39-201ENST00000244360 IPCEF1Q8WWN9 437 aaPredicted RBP21■□□□□ 0.95
RNF39-201ENST00000244360 OBP2AQ9NY56 170 aa21■□□□□ 0.95
RNF39-201ENST00000244360 NDRG4Q9ULP0 352 aaKnown RBP21■□□□□ 0.95
RNF39-201ENST00000244360 MYO1GB0I1T2 1018 aa21■□□□□ 0.95
RNF39-201ENST00000244360 TMEM229AB2RXF0 380 aa21■□□□□ 0.95
RNF39-201ENST00000244360 C1QTNF3-AMACRE9PGA6 284 aa21■□□□□ 0.95
RNF39-201ENST00000244360 FKBP9O95302 570 aa21■□□□□ 0.95
RNF39-201ENST00000244360 FMO3P31513 532 aa21■□□□□ 0.95
RNF39-201ENST00000244360 TEAD4Q15561 434 aa21■□□□□ 0.95
RNF39-201ENST00000244360 PRAMEF14Q5SWL7 426 aa21■□□□□ 0.95
RNF39-201ENST00000244360 DDX59Q5T1V6 619 aaKnown RBP eCLIP21■□□□□ 0.95
RNF39-201ENST00000244360 PRAMEF13Q5VWM6 474 aa21■□□□□ 0.95
RNF39-201ENST00000244360 TTC29Q8NA56 475 aaPredicted RBP21■□□□□ 0.95
RNF39-201ENST00000244360 PLA2G15Q8NCC3 412 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms