RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 GRK1Q15835 563 aa19.13■□□□□ 0.65
HOXC13-201ENST00000243056 GPR158Q5T848 1215 aa19.13■□□□□ 0.65
HOXC13-201ENST00000243056 GPR139Q6DWJ6 353 aa19.13■□□□□ 0.65
HOXC13-201ENST00000243056 SAMD14Q8IZD0 417 aaPredicted RBP19.13■□□□□ 0.65
HOXC13-201ENST00000243056 ENKURQ8TC29 256 aa19.13■□□□□ 0.65
HOXC13-201ENST00000243056 ZNF675Q8TD23 568 aa19.13■□□□□ 0.65
HOXC13-201ENST00000243056 C12orf57Q99622 126 aa19.13■□□□□ 0.65
HOXC13-201ENST00000243056 BARHL1Q9BZE3 327 aa19.13■□□□□ 0.65
HOXC13-201ENST00000243056 VPS9D1Q9Y2B5 631 aa19.13■□□□□ 0.65
HOXC13-201ENST00000243056 GJB3O75712 270 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 PCSK2P16519 638 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 PTPN3P26045 913 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 RGS6P49758 472 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 EPHA5P54756 1037 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 S100A12P80511 92 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 COX10Q12887 443 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 RETSATQ6NUM9 610 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 TPGS1Q6ZTW0 290 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 CDYL2Q8N8U2 506 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 TSPEARQ8WU66 669 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 ZNF707Q96C28 371 aaPredicted RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 IER2Q9BTL4 223 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 MLPHQ9BV36 600 aaPredicted RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 ELOVL6Q9H5J4 265 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 TRIM45Q9H8W5 580 aaPredicted RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 MSRAQ9UJ68 235 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 NDRG4Q9ULP0 352 aaKnown RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 MYOFQ9NZM1 2061 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 F5H5T6 163 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 MAFKO60675 156 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 RAF1P04049 648 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 CD72P21854 359 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 PTX3P26022 381 aaPredicted RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 KCNC1P48547 511 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 LARS2Q15031 903 aaKnown RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 CLLU1Q5K131 121 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 ANKRD54Q6NXT1 300 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 PDZD4Q76G19 769 aaPredicted RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 DET1Q7L5Y6 550 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 HIPK1Q86Z02 1210 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 GDPD1Q8N9F7 314 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 SP110Q9HB58 689 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 KLHL8Q9P2G9 620 aaPredicted RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 ERVW-1Q9UQF0 538 aa19.12■□□□□ 0.65
HOXC13-201ENST00000243056 TNPO3Q9Y5L0 923 aaKnown RBP19.12■□□□□ 0.65
HOXC13-201ENST00000243056 NCAM2O15394 837 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 PRAMEF12O95522 483 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 HOXA9P31269 272 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 SLC11A2P49281 568 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 POLR2JP52435 117 aaKnown RBP19.11■□□□□ 0.65
HOXC13-201ENST00000243056 RRAS2P62070 204 aaPredicted RBP19.11■□□□□ 0.65
HOXC13-201ENST00000243056 DLEU7Q6UYE1 221 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 KDELC2Q7Z4H8 507 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 CLHC1Q8NHS4 586 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 SGTBQ96EQ0 304 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 ZNF583Q96ND8 569 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 TRMOQ9BU70 441 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 ZNF416Q9BWM5 594 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 GALNT9Q9HCQ5 603 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 OBSL1O75147 1896 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 DOCK4Q8N1I0 1966 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 IGLV3-10A0A075B6K4 115 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 PRSS44E7EML9 344 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 MYL12BO14950 172 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 PTHP01270 115 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 HMGN1P05114 100 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 MYL12AP19105 171 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.11■□□□□ 0.65
HOXC13-201ENST00000243056 TFAP2EQ6VUC0 442 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 CHRDL2Q6WN34 429 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 CEP68Q76N32 757 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 TRILQ7L0X0 811 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 GALNT10Q86SR1 603 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 ATPAF2Q8N5M1 289 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 TTC29Q8NA56 475 aaPredicted RBP19.11■□□□□ 0.65
HOXC13-201ENST00000243056 CDC26Q8NHZ8 85 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 WFDC5Q8TCV5 224 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 AP2M1Q96CW1 435 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 SHARPINQ9H0F6 387 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 RACGAP1Q9H0H5 632 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 AMBNQ9NP70 447 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 CLEC4EQ9ULY5 219 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 NEUROG3Q9Y4Z2 214 aa19.11■□□□□ 0.65
HOXC13-201ENST00000243056 NYNRINQ9P2P1 1898 aaKnown RBP19.1■□□□□ 0.65
HOXC13-201ENST00000243056 LRRC14BA6NHZ5 514 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 STX16O14662 325 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 ZP3P21754 424 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 RPL35P42766 123 aaKnown RBP19.1■□□□□ 0.65
HOXC13-201ENST00000243056 TGM4P49221 684 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 MAXP61244 160 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 EXOSC2Q13868 293 aaKnown RBP19.1■□□□□ 0.65
HOXC13-201ENST00000243056 ADGRF1Q5T601 910 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 KCTD11Q693B1 232 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 NAPEPLDQ6IQ20 393 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 OR6M1Q8NGM8 313 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 SPATA22Q8NHS9 363 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 PABPC5Q96DU9 382 aaKnown RBP19.1■□□□□ 0.65
HOXC13-201ENST00000243056 GORASP2Q9H8Y8 452 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 MID1IP1Q9NPA3 183 aa19.1■□□□□ 0.65
HOXC13-201ENST00000243056 AIG1Q9NVV5 245 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms