RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 MIOSQ9NXC5 875 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 PCDHA9Q9Y5H5 950 aa12.45□□□□□ -0.42
VAMP4-201ENST00000236192 KERAO60938 352 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 NME6O75414 186 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CST3P01034 146 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 TRBC1P01850 177 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ENGP17813 658 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 GRK4P32298 578 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ETV5P41161 510 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 NRIP1P48552 1158 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 RAP2BP61225 183 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CRYZQ08257 329 aaKnown RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 AKR1C8PQ5T2L2 129 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 PLAG1Q6DJT9 500 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 PTRH1Q86Y79 214 aaKnown RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF433Q8N7K0 673 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 EXOSC8Q96B26 276 aaKnown RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 SLC19A3Q9BZV2 496 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 TAS2R10Q9NYW0 307 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CCNL1Q9UK58 526 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 HES2Q9Y543 173 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 KAT6AQ92794 2004 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 TECPR2O15040 1411 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 LACTBL1A8MY62 500 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 JUNDP17535 347 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 PTPRAP18433 802 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 SHMT1P34896 483 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 GGT2P36268 569 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 TNFSF9P41273 254 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 MAGEA6P43360 314 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 PSPHP78330 225 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 GANABQ14697 944 aaKnown RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CTU2Q2VPK5 515 aaKnown RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 USP51Q70EK9 711 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 OR10K1Q8NGX5 313 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 AKR7LQ8NHP1 331 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 TERB2Q8NHR7 220 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF419Q96HQ0 510 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CCM2Q9BSQ5 444 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 PORCNQ9H237 461 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 RPS10P5Q9NQ39 176 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ARL15Q9NXU5 204 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 KCNIP3Q9Y2W7 256 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CIB4A0PJX0 185 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 NFICP08651 508 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 TYRP14679 529 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 GPR17Q13304 367 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 HSF5Q4G112 596 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 PAGE3Q5JUK9 113 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 FAM180AQ6UWF9 173 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 HDDC3Q8N4P3 179 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ARMC5Q96C12 935 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 REPS1Q96D71 796 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CHFRQ96EP1 664 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 MED18Q9BUE0 208 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 MFFQ9GZY8 342 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CROCCQ5TZA2 2017 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ARVCFO00192 962 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 SLC7A4O43246 635 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CILPO75339 1184 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CYP17A1P05093 508 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 PIGAP37287 484 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 SOX3P41225 446 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 AVPR1BP47901 424 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 KIAA1024LP59773 190 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 SLC35A2P78381 396 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 C6orf136Q5SQH8 315 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 TREML2Q5T2D2 321 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 LARP4Q71RC2 724 aaKnown RBP eCLIP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 C12orf29Q8N999 325 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 C1orf216Q8TAB5 229 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ZFPM2Q8WW38 1151 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 GEMIN6Q8WXD5 167 aaKnown RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
VAMP4-201ENST00000236192 OR10H1Q9Y4A9 318 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 DNAJC15Q9Y5T4 150 aa12.44□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF195O14628 629 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF250P15622 560 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 TNK1Q13470 666 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 CYP27C1Q4G0S4 372 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 UNC50Q53HI1 259 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 LDB1Q86U70 411 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 PYROXD2Q8N2H3 581 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 FCAMRQ8WWV6 532 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 CPNE2Q96FN4 548 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 MCCC1Q96RQ3 725 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 COPS8Q99627 209 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 AFDNP55196 1824 aaKnown RBP12.43□□□□□ -0.42
VAMP4-201ENST00000236192 FAM86C2PA6NEL3 165 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 F5H5P2 479 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 WNT9AO14904 365 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 GRIN3BO60391 1043 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 HPGDSO60760 199 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 SC5DO75845 299 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 CDK14O94921 469 aa12.43□□□□□ -0.42
VAMP4-201ENST00000236192 BCKDHAP12694 445 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms