RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 EPHX3Q9H6B9 360 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 PCDH12Q9NPG4 1184 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 WWOXQ9NZC7 414 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 PADI2Q9Y2J8 665 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 GRIP1Q9Y3R0 1128 aa19.77■□□□□ 0.76
SNX3-201ENST00000230085 SAMHD1Q9Y3Z3 626 aaKnown RBP19.77■□□□□ 0.76
SNX3-201ENST00000230085 A0A075B6Q4 140 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 KCNE1BA0A087WTH5 132 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 K7EQS6 105 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 PLK4O00444 970 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 RHOCP08134 193 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 CTPS1P17812 591 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 S100A5P33763 92 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 VLDLRP98155 873 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 SMN1Q16637 294 aaKnown RBP19.76■□□□□ 0.75
SNX3-201ENST00000230085 DUOXA1Q1HG43 343 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 HKDC1Q2TB90 917 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 RNF219Q5W0B1 726 aaPredicted RBP19.76■□□□□ 0.75
SNX3-201ENST00000230085 KIAA0907Q7Z7F0 614 aaPredicted RBP19.76■□□□□ 0.75
SNX3-201ENST00000230085 ADIPOR2Q86V24 386 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 ZSWIM9Q86XI8 627 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 ZNF687Q8N1G0 1237 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 TCAIMQ8N3R3 496 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 ZNF557Q8N988 423 aaPredicted RBP19.76■□□□□ 0.75
SNX3-201ENST00000230085 DENND6BQ8NEG7 585 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 FLCNQ8NFG4 579 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 C9orf43Q8TAL5 461 aaPredicted RBP19.76■□□□□ 0.75
SNX3-201ENST00000230085 METTL2AQ96IZ6 378 aaKnown RBP19.76■□□□□ 0.75
SNX3-201ENST00000230085 C7orf34Q96L11 122 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 SIAEQ9HAT2 523 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 POLE4Q9NR33 117 aa19.76■□□□□ 0.75
SNX3-201ENST00000230085 FARSBQ9NSD9 589 aaKnown RBP19.76■□□□□ 0.75
SNX3-201ENST00000230085 FAM170BA6NMN3 283 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 CLCA1A8K7I4 914 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 RFXANKO14593 260 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 TBX1O43435 398 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 TRAPPC2P0DI81 140 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 TRAPPC2BP0DI82 140 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 DRD1P21728 446 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 SRSF11Q05519 484 aaKnown RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 GTF2H3Q13889 308 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 CCINQ13939 588 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 SF3B4Q15427 424 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNX3-201ENST00000230085 MAPK11Q15759 364 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 TIGD6Q17RP2 521 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 PTRHD1Q6GMV3 140 aaKnown RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 AHSA2Q719I0 299 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 LRRC70Q7Z2Q7 622 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 CCDC190Q86UF4 302 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 METTL4Q8N3J2 472 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 PARP16Q8N5Y8 322 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 IL17RDQ8NFM7 739 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 TP53INP1Q96A56 240 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 ALG14Q96F25 216 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 COL21A1Q96P44 957 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 RHNO1Q9BSD3 238 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 INPP5KQ9BT40 448 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 CIPCQ9C0C6 399 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 ZBTB20Q9HC78 741 aaPredicted RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 THUMPD1Q9NXG2 353 aaKnown RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 PPT2Q9UMR5 302 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 DLGAP4Q9Y2H0 992 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 MRPS17Q9Y2R5 130 aaKnown RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 PCDHGB3Q9Y5G1 929 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 M0R296 226 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 STK16O75716 305 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 MYCLP1P12525 358 aaPredicted RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 PRPS1L1P21108 318 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 UGT2B15P54855 530 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 FZD5Q13467 585 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 ELOAQ14241 798 aaKnown RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 COLEC12Q5KU26 742 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 TAS2R42Q7RTR8 314 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 PTOV1Q86YD1 416 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 L3MBTL4Q8NA19 623 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 OR8J2Q8NGG1 315 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 SORCS1Q8WY21 1168 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 ULK4Q96C45 1275 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 SARS2Q9NP81 518 aaKnown RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 FAM120CQ9NX05 1096 aaKnown RBP19.75■□□□□ 0.75
SNX3-201ENST00000230085 KIF17Q9P2E2 1029 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 SNX6Q9UNH7 406 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 OR51B4Q9Y5P0 310 aa19.75■□□□□ 0.75
SNX3-201ENST00000230085 GAPDHSO14556 408 aaPredicted RBP19.74■□□□□ 0.75
SNX3-201ENST00000230085 FFAR3O14843 346 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 GPR42O15529 346 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 SCN2BO60939 215 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 ZNF682O95780 498 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 CHRNB1P11230 501 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 CYP4B1P13584 511 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 GABRB1P18505 474 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 SDC1P18827 310 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 GADD45AP24522 165 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 PIK3CBP42338 1070 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 SEC13P55735 322 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 DESI1Q6ICB0 168 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 DOK6Q6PKX4 331 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 P3H2Q8IVL5 708 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 SYNPOQ8N3V7 929 aa19.74■□□□□ 0.75
SNX3-201ENST00000230085 ZBTB2Q8N680 514 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms