RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TSSK6Q9BXA6 273 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 TOR3AQ9H497 397 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 RNF186Q9NXI6 227 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 SOX14O95416 240 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 ZNF3P17036 446 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 ARRB1P49407 418 aaPredicted RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 ADAM8P78325 824 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 ARF5P84085 180 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 MEP1AQ16819 746 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 FBXO43Q4G163 708 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 ARL9Q6T311 187 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 C12orf76Q8N812 135 aaPredicted RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 FATE1Q969F0 183 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 FBXL20Q96IG2 436 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 RGS17Q9UGC6 210 aaPredicted RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 INMTO95050 263 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 ACRV1P26436 265 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 BMP8BP34820 402 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 CDKN2DP55273 166 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 MC1RQ01726 317 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 OC90Q02509 493 aaPredicted RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 IRF5Q13568 498 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 KIAA1614Q5VZ46 1190 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 KLHDC10Q6PID8 442 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 BMP8AQ7Z5Y6 402 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 TMCO2Q7Z6W1 182 aaPredicted RBP11.11□□□□□ -0.63
NOD1-201ENST00000222823 TRAM1L1Q8N609 369 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 FBXO27Q8NI29 283 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 CD180Q99467 661 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 NDC1Q9BTX1 674 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 TAS2R9Q9NYW1 312 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 OARD1Q9Y530 152 aa11.11□□□□□ -0.63
NOD1-201ENST00000222823 RBMXL2O75526 392 aaKnown RBP11.1□□□□□ -0.63
NOD1-201ENST00000222823 TACSTD2P09758 323 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 GLDCP23378 1020 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 DHPSP49366 369 aaPredicted RBP11.1□□□□□ -0.63
NOD1-201ENST00000222823 GRIK2Q13002 908 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 GFOD2Q3B7J2 385 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 MLIPQ5VWP3 458 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 FBXO42Q6P3S6 717 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 SLC15A3Q8IY34 581 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 PLA2G15Q8NCC3 412 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 OR8J3Q8NGG0 315 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 XKR8Q9H6D3 395 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 PAK6Q9NQU5 681 aaPredicted RBP11.1□□□□□ -0.63
NOD1-201ENST00000222823 SERINC1Q9NRX5 453 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 CENPMQ9NSP4 180 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 EMCNQ9ULC0 261 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 TMA7Q9Y2S6 64 aaKnown RBP11.1□□□□□ -0.63
NOD1-201ENST00000222823 PCDHGB1Q9Y5G3 927 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 PCDHGA12O60330 932 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 GSRP00390 522 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 MATN1P21941 496 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 ARCN1P48444 511 aaKnown RBP11.1□□□□□ -0.63
NOD1-201ENST00000222823 CDH11P55287 796 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 TUBA4AP68366 448 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 CAMK1Q14012 370 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 EIF4HQ15056 248 aaKnown RBP11.1□□□□□ -0.63
NOD1-201ENST00000222823 ATG9BQ674R7 924 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 MARCH9Q86YJ5 346 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 OR52B6Q8NGF0 335 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 NKD1Q969G9 470 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 MGME1Q9BQP7 344 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 SLC2A4RGQ9NR83 387 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 AIG1Q9NVV5 245 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 MARK1Q9P0L2 795 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 ABI3Q9P2A4 366 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 PDCD5O14737 125 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 SLC16A5O15375 505 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 ADH1BP00325 375 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 POLR2CP19387 275 aaPredicted RBP11.1□□□□□ -0.63
NOD1-201ENST00000222823 SHMT2P34897 504 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 CEACAM7Q14002 265 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 PON3Q15166 354 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 COLEC12Q5KU26 742 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 GALNTL5Q7Z4T8 443 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 C1orf216Q8TAB5 229 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 KLHDC7BQ96G42 594 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 SORT1Q99523 831 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 KXD1Q9BQD3 176 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 ITPAQ9BY32 194 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 WDR6Q9NNW5 1121 aaKnown RBP11.1□□□□□ -0.63
NOD1-201ENST00000222823 HRASLS2Q9NWW9 162 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 ATAD5Q96QE3 1844 aa11.1□□□□□ -0.63
NOD1-201ENST00000222823 ZNF879B4DU55 563 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 G3V2L1 256 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 SCDO00767 359 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 HNRNPA1P09651 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
NOD1-201ENST00000222823 MPC1LP0DKB6 136 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 OR1E2P47887 323 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 APLP1P51693 650 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 KCNAB2Q13303 367 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 VMACQ2NL98 169 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 SLC29A4Q7RTT9 530 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 KBTBD6Q86V97 674 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 ZFAND4Q86XD8 727 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 CHCHD4Q8N4Q1 142 aa11.09□□□□□ -0.63
NOD1-201ENST00000222823 LINC01465Q8N7H1 131 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms