RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CD52P31358 61 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 PPIGQ13427 754 aaKnown RBP eCLIP14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 NADK2Q4G0N4 442 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 C14orf28Q4W4Y0 310 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 FITM2Q8N6M3 262 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 LINC00116Q8NCU8 138 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 HAS2Q92819 552 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 PLCXD1Q9NUJ7 323 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 MPP7Q5T2T1 576 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 NEIL3Q8TAT5 605 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 PHOX2BQ99453 314 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 MTG2Q9H4K7 406 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 ZNF223Q9UK11 482 aaPredicted RBP14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 OR2B3O76000 313 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 CCL22O00626 93 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 MAP2K7O14733 419 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 PAK4O96013 591 aaPredicted RBP14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 CTBP2P56545 445 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 TMEM119Q4V9L6 283 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 OR2T5Q6IEZ7 315 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 TRIM46Q7Z4K8 759 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 ZNF283Q8N7M2 679 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 OR2T29Q8NH02 315 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 TERB2Q8NHR7 220 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 SETD7Q8WTS6 366 aaKnown RBP14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 MMABQ96EY8 250 aaPredicted RBP14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 SCN3AQ9NY46 2000 aa14.17□□□□□ -0.14
SPTLC2-201ENST00000216484 CPED1A4D0V7 1026 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 ALOX15BO15296 676 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 HLA-DPB1P04440 258 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 KLK3P07288 261 aaPredicted RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 PTPRAP18433 802 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 SOX2P48431 317 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 SLC36A4Q6YBV0 504 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 GPC2Q8N158 579 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 FAM46DQ8NEK8 389 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 PDCD1LG2Q9BQ51 273 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 ABCB8Q9NUT2 735 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 TDP1Q9NUW8 608 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 OPN1SWP03999 348 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 UBXN2BQ14CS0 331 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 PCBP1Q15365 356 aaKnown RBP eCLIP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 GCDHQ92947 438 aaPredicted RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 GLYATL1Q969I3 302 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 DPCDQ9BVM2 203 aaPredicted RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 EVI2BP34910 448 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 FGL2Q14314 439 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 OR7G1Q8NGA0 311 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 PAPOLGQ9BWT3 736 aaKnown RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 OR51I1Q9H343 314 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 B3GNT2Q9NY97 397 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 HCRTR2O43614 444 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 ZNF675Q8TD23 568 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 KCNJ9Q92806 393 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 COQ3Q9NZJ6 369 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 SLC7A8Q9UHI5 535 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 RNF6Q9Y252 685 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 TNFP01375 233 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 EDNRBP24530 442 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 HOXC8P31273 242 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 RPL10LQ96L21 214 aaKnown RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 C12orf65Q9H3J6 166 aaKnown RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 TFB2MQ9H5Q4 396 aaKnown RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 MRPL15Q9P015 296 aaKnown RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 TPSB2P20231 275 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 AGTR1P30556 359 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 NOMO3P69849 1222 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 NOMO1Q15155 1222 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 TPSAB1Q15661 275 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 COMMD7Q86VX2 200 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 PHF13Q86YI8 300 aaPredicted RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 PDZD9Q8IXQ8 264 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 OR51D1Q8NGF3 324 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 SLC22A18Q96BI1 424 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 ZNF446Q9NWS9 450 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 TP53TG5Q9Y2B4 290 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 DNMT3AQ9Y6K1 912 aaPredicted RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 A0A0U1RQJ8 604 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 SLC19A2O60779 497 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 POP4O95707 220 aaKnown RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 C8BP07358 591 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 C16orf78Q8WTQ4 265 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 SH3YL1Q96HL8 342 aaPredicted RBP14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 VPS29Q9UBQ0 182 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 CDC14AQ9UNH5 594 aa14.16□□□□□ -0.14
SPTLC2-201ENST00000216484 ROBO2Q9HCK4 1378 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 FOXO6A8MYZ6 492 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 B4GALT2O60909 372 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ST3GAL3Q11203 375 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 LIPKQ5VXJ0 399 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 SLC43A2Q8N370 569 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 OR10Q1Q8NGQ4 319 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 LRFN5Q96NI6 719 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 OR2M4Q96R27 311 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 DUSP9Q99956 384 aaKnown RBP14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 PDCD2LQ9BRP1 358 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 EXTL2Q9UBQ6 330 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 FAM230AA0A1W2PPH8 454 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 IL1AP01583 271 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 TMEM11P17152 192 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms