RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SCARB2Q14108 478 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 SNAPC1Q16533 368 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 CATSPEREQ5SY80 951 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 MPP7Q5T2T1 576 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 PRAMEF13Q5VWM6 474 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF57Q68EA5 555 aaPredicted RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 KIAA1211LQ6NV74 962 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 Q6ZNB5 142 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 ZFAND4Q86XD8 727 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 MARVELD2Q8N4S9 558 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 METTL27Q8N6F8 245 aaPredicted RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 AMER2Q8N7J2 671 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 OR5K1Q8NHB7 308 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 FAM3CQ92520 227 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 HPS1Q92902 700 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 TMEM125Q96AQ2 219 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 RNFT2Q96EX2 444 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 VMP1Q96GC9 406 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 SAMD11Q96NU1 681 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 C17orf62Q9BQA9 187 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 TMEM165Q9HC07 324 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 CDV3Q9UKY7 258 aaKnown RBP11.61□□□□□ -0.55
CHPF2-201ENST00000035307 PCDHB3Q9Y5E6 796 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 PCDHB14Q9Y5E9 798 aa11.61□□□□□ -0.55
CHPF2-201ENST00000035307 AIREO43918 545 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 UGT2B17O75795 530 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 GSRP00390 522 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ETFAP13804 333 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 AGXTP21549 392 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 CXCR2P25025 360 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PSMB5P28074 263 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 P2RY2P41231 377 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ANXA11P50995 505 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 MC1RQ01726 317 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 RAB39AQ14964 217 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ADGRG6Q86SQ4 1221 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 CNTN4Q8IWV2 1026 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PROKR1Q8TCW9 393 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 NETO1Q8TDF5 533 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 TBX5Q99593 518 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 LTB4R2Q9NPC1 389 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 POLE4Q9NR33 117 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ERI3O43414 337 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 NARSO43776 548 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 TCEA1P23193 301 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ALDH3A2P51648 485 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 MLLT10P55197 1068 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 TARDBPQ13148 414 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 TMEM236Q5W0B7 351 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 CEACAM20Q6UY09 585 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PYURFQ96I23 114 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 FAIM2Q9BWQ8 316 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PRDM8Q9NQV8 689 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PSME2Q9UL46 239 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 H3BNX3 289 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF195O14628 629 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 OR10H2O60403 315 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 LATS1O95835 1130 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ZNF30P17039 623 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 JAK1P23458 1154 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 DHPSP49366 369 aaPredicted RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PDCD4Q53EL6 469 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 IFI44LQ53G44 452 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 AFMIDQ63HM1 303 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 SYCE2Q6PIF2 218 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 TMIGD1Q6UXZ0 262 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 Q6ZS52 159 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 MINDY1Q8N5J2 469 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ISOC1Q96CN7 298 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 BIRC8Q96P09 236 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 QRFPRQ96P65 431 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 SLC17A9Q9BYT1 436 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 LMAN1LQ9HAT1 526 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 SERGEFQ9UGK8 458 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 FADS2P1A8MWK0 482 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 H3BNH8 94 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 MOSPD3O75425 235 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 CFIP05156 583 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 CCNYL3P0C7X3 344 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PABPC4LP0CB38 370 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 POLR2CP19387 275 aaPredicted RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ALAS2P22557 587 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ACSL1P33121 698 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 TOP3AQ13472 1001 aaPredicted RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 LRRC32Q14392 662 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ZBED5Q49AG3 693 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 COLEC12Q5KU26 742 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 UGT2A3Q6UWM9 527 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ADGRG5Q8IZF4 528 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 PELI3Q8N2H9 469 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 ADAMTS15Q8TE58 950 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 MYDGFQ969H8 173 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 RHBDF1Q96CC6 855 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 F2RL3Q96RI0 385 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 TRIB3Q96RU7 358 aa11.6□□□□□ -0.55
CHPF2-201ENST00000035307 NAA50Q9GZZ1 169 aaKnown RBP11.6□□□□□ -0.55
CHPF2-201ENST00000035307 GPR45Q9Y5Y3 372 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms