RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Snx16Q8C080 344 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Sept11Q8C1B7 431 aaKnown RBP4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Snx30Q8CE50 437 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Adam4Q8CGQ2 763 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Pym1Q8CHP5 203 aaKnown RBP4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Stau2Q8CJ67 570 aaKnown RBP4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Fnbp1lQ8K012 605 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 UvragQ8K245 698 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Fam13bQ8K2H3 851 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 GaleQ8R059 347 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 ZwilchQ8R060 589 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Znf768Q8R0T2 568 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Chrna3Q8R4G9 499 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Med17Q8VCD5 649 aaKnown RBP4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Atp1a1Q8VDN2 1023 aaKnown RBP4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Olfr535Q8VGL3 312 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 ApofQ91V80 315 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 DcxrQ91X52 244 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Pomgnt1Q91X88 660 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Rpe65Q91ZQ5 533 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Mrpl37Q921S7 423 aaKnown RBP4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Acy1Q99JW2 408 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cuedc2Q9CXX9 284 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cldn34b2Q9D9N2 209 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Aldh7a1Q9DBF1 539 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Rdh14Q9ERI6 334 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cd200r1Q9ES57 326 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Mbd1Q9Z2E2 636 aa4.09□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 LystP97412 3788 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Igkv12-46A0A140T8P6 115 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Olfr1089A0A1L1SRK6 311 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Card9A2AIV8 536 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Zfp352A2AML7 551 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Olfr1188A2AV10 312 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Gm1993A6X8I0 212 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Armc4B2RY50 1037 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 C7D3YXF5 845 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 SlxD3Z347 212 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cyp4f40G3UW81 524 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Fbxw15L7N1X6 466 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Olfr741L7N1Y5 311 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Ifnb1P01575 182 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Il3P01586 166 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cxcl10P17515 98 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Hsd3b1P24815 373 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Mmp13P33435 472 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Agtr2P35374 363 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 CapzbP47757 277 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 GuloP58710 440 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Ube2iP63280 158 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Neurog2P70447 263 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cxcr5Q04683 374 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cdk18Q04899 451 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Trmt10cQ3UFY8 414 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Itga1Q3V3R4 1179 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Pla2g4dQ50L43 825 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Fstl4Q5STE3 841 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Arcn1Q5XJY5 511 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Nr1h2Q60644 446 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Stip1Q60864 543 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Olfr1065Q7TR70 313 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Olfr845Q7TRG2 312 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Haus4Q8BFT2 363 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Psmd11Q8BG32 422 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Sult2a8Q8BGL3 282 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Ankrd9Q8BH83 326 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Slu7Q8BHJ9 585 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 LipkQ8BM14 398 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Fra10ac1Q8BP78 315 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Ndrg4Q8BTG7 352 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Efl1Q8C0D5 1127 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Tmem120aQ8C1E7 343 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 4922502D21RikQ8C634 189 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Trip10Q8CJ53 603 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Treml1Q8K558 317 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Klhl20Q8VCK5 604 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Apol9aQ8VDU3 310 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Olfr371Q8VGB8 312 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 PxnQ8VI36 591 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Pcdha5Q91Y15 934 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 WacQ924H7 646 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Smtnl1Q99LM3 459 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Decr1Q9CQ62 335 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 MtrexQ9CZU3 1040 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Dnase1l1Q9D7J6 314 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Dennd6bQ9D9V7 585 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Tceal6Q9DB24 200 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Entpd4Q9DBT4 613 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cpne8Q9DC53 577 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Cyp4f14Q9EP75 524 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Vmn1r52Q9EP79 309 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Tubb3Q9ERD7 450 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Icam4Q9ERM2 262 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 P2ry4Q9JJS7 361 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Drg2Q9QXB9 364 aaKnown RBP4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Dmrt1Q9QZ59 374 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Htra1Q9R118 480 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Lhx9Q9WUH2 397 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 Psmd13Q9WVJ2 376 aa4.08□□□□□ -1.76
Hmgb1-203ENSMUST00000110505 B4galt6Q9WVK5 382 aa4.08□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms