RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Olfr1276Q8VF40 312 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Clic1Q9Z1Q5 241 aaKnown RBP16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm14085A2AWR5 660 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Skint10A7TZG1 354 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Npc1O35604 1277 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Agtr1aP29754 359 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 UbqlnlQ14DL0 610 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 AptxQ7TQC5 342 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zcchc3Q8BPK2 400 aaKnown RBP16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr599Q8VG01 315 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Trpm6Q8CIR4 2028 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Wnt8aQ64527 354 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Clba1Q8BHN9 321 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Esrp2Q8K0G8 717 aaKnown RBP16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Me2Q99KE1 589 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tdrd6P61407 2134 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 UbdP63072 162 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Pde7aP70453 456 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp658Q5PPQ4 887 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Borcs8Q9D6Y4 120 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cir1Q9DA19 450 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr671A0A1B0GSN5 317 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm6592A2AHC7 168 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm14744B1AVU4 173 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Nthl1O35980 300 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Hoxb9P20615 250 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Kcnh6Q32ME0 950 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Arhgef15Q5FWH6 849 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Acvrl1Q61288 502 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gdi2Q61598 445 aaKnown RBP16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 TiparpQ8C1B2 657 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 CtbsQ8R242 366 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 5430402E10RikQ9D3N5 173 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tpk1Q9R0M5 243 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Btnl4A2CG29 586 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 2610028H24RikG5E8K1 270 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fv4P11370 679 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Arl14Q3SXC5 192 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Bpifb1Q61114 474 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp429Q7M6Y0 485 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sppl3Q9CUS9 384 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 AhspQ9CY02 102 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 1700064H15RikD3Z4D4 81 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tcte3P11985 191 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rhbdf1Q6PIX5 856 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Clec4b1Q7TS58 209 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ppp1r1cQ8BKK4 108 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Lrit1Q8K099 624 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp64Q99KE8 643 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Smok4aA0JLX3 433 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Vmn2r24D3YUI0 854 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Glp1rO35659 463 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc22a15Q504N2 544 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 SowahaQ8BLS7 548 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sp110Q8BVK9 445 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Kdelr3Q8R1L4 214 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc25a11Q9CR62 314 aaKnown RBP16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Nmrk2Q9D7C9 195 aa16.1■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fam71aB7XG49 585 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm498D3YYH9 372 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tmed4Q8R1V4 227 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Lcn9Q9D267 178 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Hipk2Q9QZR5 1196 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr1480A0A140LIR8 359 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm9008E9PVG0 424 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Grap2O89100 322 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 AbraclQ4KML4 81 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Abcb7Q61102 752 aaKnown RBP16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Prmt6Q6NZB1 378 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fank1Q9DAM9 344 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Enpp2Q9R1E6 862 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Eci2Q9WUR2 391 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cldn34b1B1AZQ8 209 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Vmn2r85G3UW56 850 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Entpd2O55026 495 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Il3P01586 166 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Kndc1Q0KK55 1742 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cd37Q61470 281 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tet3Q8BG87 1668 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 9130023H24RikQ8BG98 337 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Npas4Q8BGD7 802 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Itih5Q8BJD1 952 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Mon1bQ8BMQ8 553 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 FarsaQ8C0C7 508 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp62Q8C827 914 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cml2Q8CHQ9 238 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc36a1Q8K4D3 475 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Micu1Q8VCX5 477 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Adgrl4Q923X1 739 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cryl1Q99KP3 319 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cldn34b2Q9D9N2 209 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tubb3Q9ERD7 450 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm10801F7C7Q0 168 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm21915J3QPM7 133 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Phox2bO35690 314 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cd63P41731 238 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 XkrxQ5GH68 449 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ecm1Q61508 559 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 HlxQ61670 476 aa16.09■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Polr2mQ6P6I6 366 aa16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 89 ms