RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Cab39Q06138 341 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 MlanaQ2TA50 113 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm732Q3V0P9 516 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Zc3h11aQ6NZF1 792 aaKnown RBP12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr1355Q7TQU9 310 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Prr11Q8BHE0 368 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Txnl4bQ8BUH1 149 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fam155aQ8CCS2 467 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tnfaip8l1Q8K288 186 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Oas1gQ8K469 367 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ptcd2Q8R3K3 381 aaKnown RBP12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ints14Q8R3P6 515 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ak6Q8VCP8 172 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cbx7Q8VDS3 158 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pdzd3Q99MJ6 498 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ube2fQ9CY34 185 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 5530401A14RikQ9D3H9 131 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 TescQ9JKL5 214 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slc5a3Q9JKZ2 718 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Socs6Q9JLY0 533 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr71Q9QZ18 312 aa12.96□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr1375A0A0N4SUP0 313 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm3248K7N721 186 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mkln1O89050 735 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Akt1P31750 480 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rnf19aP50636 840 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rab42Q0PD08 215 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cnpy1Q4VAB4 94 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Coq8bQ566J8 533 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Laptm4aQ60961 233 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Bcl2l1Q64373 233 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Kcnk10Q8BUW1 535 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fbxl3Q8C4V4 428 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 P3h2Q8CG71 703 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Bag5Q8CI32 447 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Syn3Q8JZP2 579 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Blzf1Q8R2X8 403 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr308Q8VFP2 308 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr622Q8VGY7 317 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tnfrsf12aQ9CR75 129 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tmem269Q9D4Y8 254 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ndufs3Q9DCT2 263 aaKnown RBP12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tsc22d3Q9Z2S7 137 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Btnl4A2CG29 586 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 2610001J05RikF2Z3Y9 59 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 C9P06683 548 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Chrm4P32211 479 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 CskP41241 450 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slc26a1P58735 704 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Csnk2bP67871 215 aaKnown RBP12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fut7Q11131 389 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Serpinf2Q61247 491 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dmc1Q61880 340 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 CtsoQ8BM88 312 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Glt28d2Q8BML3 165 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 C5ar2Q8BW93 344 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 SynpoQ8CC35 929 aaKnown RBP12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mta1Q8K4B0 715 aaKnown RBP12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cox4i2Q91W29 172 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cxxc1Q9CWW7 660 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Vmn1r29Q9EQ41 303 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Cldn9Q9Z0S7 217 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Rhox2dW4VSN9 191 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Wdr81Q5ND34 1934 aa12.95□□□□□ -0.34
Nup88-201ENSMUST00000035283 Lzts3A2AHG0 700 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm14147A2AQX6 640 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Hpse2B2RY83 592 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pdzd8B9EJ80 1147 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 AU018091E9PWS4 684 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Vmn1r77E9PY60 306 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 NsmafO35242 920 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 ThP24529 498 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mapk1P63085 358 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Phlda1Q62392 405 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Znf219Q6IQX8 726 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Enkd1Q7TSV9 346 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Lrrtm2Q8BGA3 515 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fbxl4Q8BH70 621 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Ccdc126Q8BIS8 140 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 SgtaQ8BJU0 315 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 PxkQ8BX57 582 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Olfr345Q8VGK4 311 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 AmnQ99JB7 458 aaKnown RBP12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Dnase1l2Q9D1G0 278 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Sacm1lQ9EP69 587 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Mid2Q9QUS6 705 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Plekhb1Q9QYE9 243 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Fam43bA2AM80 330 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Aadacl2B2RWD2 401 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Pate3B3GLJ3 98 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 CrnnD3YUU6 520 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 8030474K03RikE9Q4Y8 554 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 MlxO08609 298 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Tssk2O54863 358 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 IghmP01872 454 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 HmbsP22907 361 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Alox12eP55249 662 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 QrfprP83861 433 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 Malt1Q2TBA3 832 aa12.94□□□□□ -0.34
Nup88-201ENSMUST00000035283 March5Q3KNM2 278 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms