RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Olfr1387Q8VFA9 311 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pbld1Q9DCG6 288 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hspb3Q9QZ57 154 aa9.85□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Aknad1E9Q8N6 675 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lrrc31F6VYM1 502 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pcsk2P21661 637 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ccbe1Q3MI99 408 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Plk5Q4FZD7 595 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 FcrlbQ5DRQ8 427 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Zfp658Q5PPQ4 887 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ttf1Q62187 859 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Elp2Q91WG4 831 aaKnown RBP9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn2r18E9Q280 788 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Bmp6P20722 510 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Foxr1Q3UTB7 268 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nlrc3Q5DU56 1064 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gdi2Q61598 445 aaKnown RBP9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Proser3Q7TSA6 634 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 FRRS1Q8K385 592 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Abhd11Q8K4F5 307 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn1r198Q8R263 300 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gid4Q9CPY6 217 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Trmt5Q9D0C4 501 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 AcoxlQ9DBS4 632 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Adat1Q9JHI2 499 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Psma1Q9R1P4 263 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nfkb2Q9WTK5 899 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr1215A3KGY3 312 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Acvr2aP27038 513 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ephx2P34914 554 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lhx1P63006 406 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nr4a2Q06219 598 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pan3Q640Q5 837 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rftn1Q6A0D4 554 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Calm5Q6W3E0 140 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Map1sQ8C052 973 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Phtf2Q8CB19 747 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr826Q8VFU6 313 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr825Q8VFU7 320 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mrgprb4Q91ZC0 321 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 MsraQ9D6Y7 233 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 TsnaxQ9QZE7 290 aaKnown RBP9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rab25Q9WTL2 213 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm10037E9PX85 104 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Brcc3P46737 291 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Polr1dP97304 133 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Zzz3Q6KAQ7 910 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr1308Q7TQX0 320 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ofcc1Q8BGX4 166 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Zcchc3Q8BPK2 400 aaKnown RBP9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lcmt2Q8BYR1 686 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pcolce2Q8R4W6 414 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tmem5Q8VDX6 444 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Chmp1aQ921W0 196 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 AhrP30561 848 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cdkn2bP55271 130 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lrrn4clQ3TYX2 239 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 HecaQ3V1N5 544 aaKnown RBP9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 XkrxQ5GH68 449 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rslcan18Q7M6X5 460 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc43a1Q8BSM7 564 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Dpep2Q8C255 478 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 GatcQ8CBY0 155 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Zmynd11Q8R5C8 602 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ddx1Q91VR5 740 aaKnown RBP9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Arl4dQ99PE9 201 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Prss16Q9QXE5 509 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 CalcrlQ9R1W5 463 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm6710A2ART0 554 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Phf11cB4XVP9 339 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Lmo2P25801 158 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hcrtr1P58307 416 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rps17P63276 135 aaKnown RBP9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Dcst1Q059Y8 732 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Xkr4Q5GH67 647 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc10a7Q5PT53 340 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tas2r136Q7TQA8 305 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr17Q7TRM9 315 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rbm48Q8K2X2 371 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gtf2f2Q8R0A0 249 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gpr37l1Q99JG2 481 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tktl1Q99MX0 595 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Zdhhc13Q9CWU2 622 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Agpat5Q9D1E8 365 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Q9DAD0 168 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Dclk1Q9JLM8 756 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ramp2Q9WUP0 189 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Duox1A2AQ92 1551 aa9.84□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mtnd1P03888 318 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ntrk2P15209 821 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cmklr1P97468 371 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 PgrQ00175 926 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gxylt1Q3UHH8 404 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Znf322Q8BZ89 410 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zbtb26Q8C8S0 451 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Agbl2Q8CDK2 862 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Prdm9Q96EQ9 843 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 PigkQ9CXY9 395 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Med1Q925J9 1575 aa9.83□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc9a6A1L3P4 702 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms