RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Tmem181aQ3U3W2 474 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Krt76Q3UV17 594 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ggt1Q60928 568 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Bcap29Q61334 240 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 St8sia4Q64692 359 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Hist1h2aaQ8CGP4 129 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr1278Q8VF39 313 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Camk1Q91YS8 374 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Fam69bQ99ML4 431 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 H2-BlV9GXR0 257 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tmem245B1AZA5 876 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Fam71f2B2RXB0 297 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Zfp277E9Q6D6 583 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Phox2bO35690 314 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 MndaP0DOV1 425 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 PthlhP22858 175 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 HmgclP38060 325 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cd244Q07763 397 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Grxcr1Q50H32 290 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Chsy3Q5DTK1 884 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 MarcoQ60754 518 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Kir3dl2Q673W2 388 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 A4galtQ67BJ4 359 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 MyorgQ69ZQ1 716 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pik3c3Q6PF93 887 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 HjurpQ6PG16 667 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tmc6Q7TN60 810 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Lats2Q7TSJ6 1042 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Q8BHB7 409 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Lrch3Q8BVU0 778 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Peli3Q8BXR6 445 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Nrn1lQ8C4W3 162 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Slc49a3Q8CE47 516 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 C1raQ8CG16 707 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ints14Q8R3P6 515 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 DutQ8VCG1 200 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 EtfaQ99LC5 333 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Htra3Q9D236 459 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ankrd7Q9D504 279 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Slc39a5Q9D856 535 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Igkv5-45A0A0B4J1J1 115 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm35911A0A1D5RLS7 214 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm6592A2AHC7 168 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Slc16a8O35308 492 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Dnajb3O35723 242 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Chst3O88199 472 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Mtx2O88441 263 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Bmp4P21275 408 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ido1P28776 407 aaKnown RBP10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ptger3P30557 365 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rps14P62264 151 aaKnown RBP10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Hyal4Q05A56 481 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Zfp935Q14DI0 353 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm732Q3V0P9 516 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 SctrQ5FWI2 447 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 FaddQ61160 205 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Nt5eQ61503 576 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Med22Q62276 200 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Runx3Q64131 409 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ddx51Q6P9R1 639 aaKnown RBP10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Q80Y39 304 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rbbp8Q80YR6 893 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cadm2Q8BLQ9 435 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Phf11aQ8BVM9 293 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Stk-ps2Q8C0V7 499 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Lancl3Q8CD19 420 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Thap1Q8CHW1 210 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Mcfd2Q8K5B2 145 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tram1l1Q8QZR0 363 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Slc38a4Q8R1S9 547 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Capn8Q91VA3 703 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gorasp1Q91X51 446 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Slc25a36Q922G0 311 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 AassQ99K67 926 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Clcc1Q99LI2 539 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cadm3Q99N28 396 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Fabp12Q9DAK4 132 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Dgat2Q9DCV3 388 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ndrg2Q9QYG0 371 aaKnown RBP10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Adam18Q9R157 719 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Prr14lE9Q7C4 1971 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm4869A0A1B0GSG7 984 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 TagapB2RWW0 714 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm3594E9Q2A7 267 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Emp3O35912 163 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cops4O88544 406 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 LckP06240 509 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cpa3P15089 417 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Kcnc1P15388 511 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Kcnk2P97438 426 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 PomkQ3TUA9 349 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pnpla1Q3V1D5 599 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Irf4Q64287 450 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rgs8Q8BXT1 180 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Tmem30aQ8VEK0 364 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr535Q8VGL3 312 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Q91W34 466 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 L2hgdhQ91YP0 464 aa10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cstf3Q99LI7 717 aaKnown RBP10.51□□□□□ -0.73
Msh3-201ENSMUST00000022220 2310003L06RikQ9CV82 495 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms