RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Natd1Q9DBW3 110 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ralgps2Q9ERD6 590 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm8251F6VUT6 1994 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Krt28A6BLY7 462 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 TspearJ3S6Y1 670 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Sf3b6P59708 125 aaKnown RBP16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Scn4bQ7M729 228 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Reep1Q8BGH4 201 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 NapepldQ8BH82 396 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Trim3Q9R1R2 744 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr1253A2AUA2 318 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Chst13D3Z6E3 336 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr746E9Q840 314 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Rnpepl1G5E872 720 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Irs1P35569 1233 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Mtf1Q07243 675 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Pyroxd2Q3U4I7 581 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gramd2bQ6PEM6 445 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr1251Q7TQZ3 318 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr591Q7TRR7 314 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Insig1Q8BGI3 259 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Pomt2Q8BGQ4 820 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Tigd4Q8BUZ3 513 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Zhx3Q8C0Q2 951 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 ArhgdiaQ99PT1 204 aaKnown RBP16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Fam13cQ9DBR2 601 aa16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 PfkpQ9WUA3 784 aaKnown RBP16.25■□□□□ 0.19
Ctcf-201ENSMUST00000005841 6720489N17RikA0A1Y7VJW0 127 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm6576F6YTZ4 274 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm6337K7N6X9 211 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm3115L7N285 211 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 MntO08789 591 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Kifc3O35231 824 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Epb42P49222 691 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 ArsbP50429 534 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gfi1P70338 423 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ano7Q14AT5 859 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gtpbp2Q3UJK4 602 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Tmem255bQ5FW56 369 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Arhgef15Q5FWH6 849 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Senp5Q6NXL6 749 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Pramel7Q810Y8 479 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Fam109aQ8BH49 266 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 St7lQ8K4P7 559 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Rnf121Q8R1Z9 327 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr357Q8VFP4 308 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc2a10Q8VHD6 536 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 S100pbpQ9D5K4 396 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Adh6bA0A1D5RMB0 384 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr521E9Q519 321 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Zw10O54692 779 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc22a2O70577 553 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc11a2P49282 568 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Fam47cQ14BE7 430 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vsx2Q61412 361 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Dusp11Q6NXK5 321 aaKnown RBP16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Hyal5Q812F3 526 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Fbxl4Q8BH70 621 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gprin3Q8BWS5 763 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 SynpoQ8CC35 929 aaKnown RBP16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vmn1r206Q8R277 312 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Slc13a3Q91Y63 600 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gemin2Q9CQQ4 269 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Zfp773Q9CZ29 471 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Kcnd3Q9Z0V1 655 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm11127A7VMS2 374 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm1330D3Z460 184 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vmn1r77E9PY60 306 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Man2a1P27046 1150 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Folr1P35846 255 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 RasefQ5RI75 627 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Cramp1Q6PG95 1285 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Castor2Q8CAB8 329 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Plac9Q8K262 108 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr448Q8VES9 310 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Cyp2c50Q91X77 490 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Trhr2Q9ERT2 382 aa16.24■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Btnl6A2CG22 539 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Apoc3P33622 99 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Sox6P40645 827 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gabrr2P56476 465 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Tmprss11cQ1JRP2 431 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Spata48Q5NC83 441 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Cyp2c54Q6XVG2 490 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Fam46bQ8C152 427 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gatad2aQ8CHY6 629 aaKnown RBP16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vmn1r234Q8R298 329 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 SostQ99P68 211 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Smad9Q9JIW5 430 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vmn2r114E9Q281 856 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm4788E9Q8B5 879 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Olfr173E9QAT7 321 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ccdc149F6V035 524 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Gm28048F7BCN0 99 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Vmn2r6H3BK29 913 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Ring1O35730 406 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Hoxa2P31245 372 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Cxcr4P70658 359 aa16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Eif1adQ3THJ3 170 aaKnown RBP16.23■□□□□ 0.19
Ctcf-201ENSMUST00000005841 Nxf3Q4ZGD9 553 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms