RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Rftn1Q6A0D4 554 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trim17Q7TPM3 477 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Krr1Q8BGA5 380 aaKnown RBP18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Q8C4P0 716 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mterf3Q8R3J4 412 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr986Q8VFN6 312 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mcoln1Q99J21 580 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Clcc1Q99LI2 539 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Glipr1l1Q9DAG6 236 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Arl10Q9QXJ4 243 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Rad18Q9QXK2 509 aaKnown RBP18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 1700014D04RikJ3QMS2 983 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vmn2r97K7N6Z2 861 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm5152L7N200 190 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 AlyrefO08583 255 aaKnown RBP18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Rgs7O54829 469 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 CremP27699 357 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Acsl1P41216 699 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Dab1P97318 588 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vipr1P97751 459 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 LvrnQ2KHK3 559 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Myo1dQ5SYD0 1006 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Satb1Q60611 764 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Snta1Q61234 503 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 C1qtnf6Q6IR41 264 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Znf32Q80V23 272 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Pomt2Q8BGQ4 820 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Plekhs1Q8BW88 474 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Macrod1Q922B1 323 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gpr37l1Q99JG2 481 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 NgrnQ99KS2 293 aaKnown RBP18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mrpl54Q9CPW3 135 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Rnase10Q9D5A9 208 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Upk3aQ9JKX8 287 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Dnajb1Q9QYJ3 340 aaKnown RBP18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Galk1Q9R0N0 392 aa18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 FarsbQ9WUA2 589 aaKnown RBP18.05■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm17093F6XGJ4 214 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 H2-AaP01910 256 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Phxr1P15973 60 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Hnf4aP49698 474 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slc10a2P70172 348 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Scn1bP97952 218 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Stox2Q499E5 926 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Sez6l2Q4V9Z5 910 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Cpeb2Q812E0 521 aaKnown RBP18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Prmt5Q8CIG8 637 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Zbtb20Q8K0L9 741 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Agfg1Q8K2K6 561 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Fam129bQ8R1F1 749 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Neto1Q8R4I7 533 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Adgre4Q91ZE5 689 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 MispQ9D279 648 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 9030624G23RikQ9D308 155 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Ralgps2Q9ERD6 590 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mid2Q9QUS6 705 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Pld1Q9Z280 1074 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vmn2r3H3BJ88 915 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 PtgdsO09114 189 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Bcl6P41183 707 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 DbtP53395 482 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Sim1Q61045 765 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Fbxl4Q8BH70 621 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Q8C3W1 322 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Twist2Q9D030 160 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slco1a4Q9EP96 670 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gde1Q9JL56 331 aa18.04■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 CerklA2AQH1 525 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 A530032D15RikE9Q422 215 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm28048F7BCN0 99 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr319L7MTY4 306 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Man2b2O54782 1018 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Bmp6P20722 510 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Rph3aP47708 681 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 GcgP55095 180 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 InhaQ04997 366 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mex3cQ05A36 652 aaKnown RBP18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slc37a3Q3TIT8 494 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Cnpy1Q4VAB4 94 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Prss36Q5K2P8 849 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Mapk10Q61831 464 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Pkp4Q68FH0 1190 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slc6a15Q8BG16 729 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Guf1Q8C3X4 651 aaKnown RBP18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Serpinb1aQ9D154 379 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 1700034I23RikQ9D9Q3 184 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Col4a6B1AVK5 1691 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm12695A2AGB2 545 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Pramef25A2ASI9 494 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Trmt1lA2RSY6 728 aaKnown RBP18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm7945F6QI24 236 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Fbxw9F8VPX2 458 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gm17019K7N6W5 255 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 FiglaO55208 194 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Gh1P06880 216 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Zic1P46684 447 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tmem199Q5SYH2 208 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Klra2Q60660 288 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Fam149b1Q6NSV7 578 aa18.03■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Hfe2Q7TQ32 420 aa18.03■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms