RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 HBA1P69905 142 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 DOC2BQ14184 412 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 THOC7Q6I9Y2 204 aaKnown RBP13.3□□□□□ -0.28
PHGDH-233ENST00000642021 AGTRAPQ6RW13 159 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 Q6ZVL8 140 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 TUBA1AQ71U36 451 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 HSD11B1LQ7Z5J1 315 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 TMCO2Q7Z6W1 182 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-233ENST00000642021 OR7G3Q8NG95 312 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 OR9Q2Q8NGE9 314 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 OR4C15Q8NGM1 316 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 HUS1BQ8NHY5 278 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 UTP15Q8TED0 518 aaKnown RBP13.3□□□□□ -0.28
PHGDH-233ENST00000642021 PRM3Q9NNZ6 103 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 ITM2CQ9NQX7 267 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 INSL5Q9Y5Q6 135 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 H0YIV9 168 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 SOD2P04179 222 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 PABPC1P11940 636 aaKnown RBP13.29□□□□□ -0.28
PHGDH-233ENST00000642021 GABRR2P28476 465 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 PCGF2P35227 344 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 CSNK2BP67870 215 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 DMPKQ09013 629 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 EXOC3L2Q2M3D2 409 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 MLIPQ5VWP3 458 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 Q6ZVU0 165 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 OTOP2Q7RTS6 562 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 LACC1Q8IV20 430 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 NLGN4XQ8N0W4 816 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 POC5Q8NA72 575 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 C11orf65Q8NCR3 313 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 OR4A15Q8NGL6 344 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 CHTF18Q8WVB6 975 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 COQ8BQ96D53 544 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 STOX2Q9P2F5 926 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-233ENST00000642021 UGDHO60701 494 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 SLCO2B1O94956 709 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 SLC16A8O95907 504 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 ADORA3P0DMS8 318 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 PCSK2P16519 638 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 BDKRB1P46663 353 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 LIMK1P53667 647 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 EPHB3P54753 998 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 MC1RQ01726 317 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 ST3GAL4Q11206 333 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 CDC20Q12834 499 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 NEK10Q6ZWH5 1172 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 HTR3DQ70Z44 454 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 ASZ1Q8WWH4 475 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 FCGR1BQ92637 280 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 CLP1Q92989 425 aaKnown RBP13.29□□□□□ -0.28
PHGDH-233ENST00000642021 MYDGFQ969H8 173 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 Q96MT0 163 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 LSM7Q9UK45 103 aaKnown RBP13.29□□□□□ -0.28
PHGDH-233ENST00000642021 ACSL6Q9UKU0 697 aa13.29□□□□□ -0.28
PHGDH-233ENST00000642021 GNG14A0A1W2PPG7 69 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 PCDH17O14917 1159 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 GSTT2P0CG29 244 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 GSTT2BP0CG30 244 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 ETV3P41162 512 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 DGKEP52429 567 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 CTSCP53634 463 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 RPS13P62277 151 aaKnown RBP13.28□□□□□ -0.28
PHGDH-233ENST00000642021 SPIBQ01892 262 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 ARMCX4Q5H9R4 360 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 ZNF362Q5T0B9 420 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-233ENST00000642021 TPRG1LQ5T0D9 272 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 GRHL2Q6ISB3 625 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 TMEM53Q6P2H8 277 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 DEFB128Q7Z7B8 93 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 LGI4Q8N135 537 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 PARP16Q8N5Y8 322 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 CHCHD6Q9BRQ6 235 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 CCM2Q9BSQ5 444 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 TSEN34Q9BSV6 310 aaKnown RBP13.28□□□□□ -0.28
PHGDH-233ENST00000642021 HS3ST2Q9Y278 367 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 MGAT4DA6NG13 374 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 FADS2P1A8MWK0 482 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 TNFRSF21O75509 655 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 GSTM1P09488 218 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 HSMCR30P0CW71 290 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 ZNF8P17098 575 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-233ENST00000642021 SERPINB1P30740 379 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 PXNP49023 591 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-233ENST00000642021 RAB33AQ14088 237 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 IER5LQ5T953 404 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 USP43Q70EL4 1123 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 VPS37AQ8NEZ2 397 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 CIDECQ96AQ7 238 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-233ENST00000642021 NXF2Q9GZY0 626 aaKnown RBP13.28□□□□□ -0.28
PHGDH-233ENST00000642021 FAM83DQ9H4H8 585 aa13.28□□□□□ -0.28
PHGDH-233ENST00000642021 MRPL17Q9NRX2 175 aaKnown RBP13.28□□□□□ -0.28
PHGDH-233ENST00000642021 MYOFQ9NZM1 2061 aa13.27□□□□□ -0.28
PHGDH-233ENST00000642021 SAP18O00422 153 aaKnown RBP13.27□□□□□ -0.28
PHGDH-233ENST00000642021 NPC1O15118 1278 aa13.27□□□□□ -0.28
PHGDH-233ENST00000642021 ADAMDEC1O15204 470 aa13.27□□□□□ -0.28
PHGDH-233ENST00000642021 TSPAN6O43657 245 aa13.27□□□□□ -0.28
PHGDH-233ENST00000642021 AOC2O75106 756 aa13.27□□□□□ -0.28
PHGDH-233ENST00000642021 PSIP1O75475 530 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms