RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 GRIA3P42263 894 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 UQCRFS1P47985 274 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 HTR6P50406 440 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CSNK1G2P78368 415 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 MEF2AQ02078 507 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 PCDH1Q08174 1060 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 LAPTM5Q13571 262 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 E2F2Q14209 437 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 NAA25Q14CX7 972 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 ZRSR2Q15696 482 aaKnown RBP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 PDCD2Q16342 344 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CPSF6Q16630 551 aaKnown RBP eCLIP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CLPPQ16740 277 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 DEFB109BQ30KR1 87 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 PAGE2BQ5JRK9 111 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 LIPJQ5W064 366 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 ZNF425Q6IV72 752 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CGB2Q6NT52 195 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 PAQR7Q86WK9 346 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 KRT78Q8N1N4 520 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 PIWIL2Q8TC59 973 aaKnown RBP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 METTL6Q8TCB7 284 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 TWIST2Q8WVJ9 160 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 THOC1Q96FV9 657 aaKnown RBP8.98□□□□□ -0.97
PHGDH-228ENST00000641847 ZDHHC12Q96GR4 267 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 FAR2Q96K12 515 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 PRAP1Q96NZ9 151 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 CD180Q99467 661 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 AIF1LQ9BQI0 150 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 NUDT22Q9BRQ3 303 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 DDA1Q9BW61 102 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 KLHL25Q9H0H3 589 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 SPNS1Q9H2V7 528 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 ELOVL6Q9H5J4 265 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 RABEP2Q9H5N1 569 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 NPHS2Q9NP85 383 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 TMEM184CQ9NVA4 438 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 EPHA6Q9UF33 1036 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 KLHL3Q9UH77 587 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 BTRCQ9Y297 605 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 TRAF6Q9Y4K3 522 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 TIMM22Q9Y584 194 aa8.98□□□□□ -0.97
PHGDH-228ENST00000641847 FEZF1A0PJY2 475 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 TLCD2A6NGC4 264 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 SLCO1B7G3V0H7 640 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 H0YIV9 168 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 MANBAO00462 879 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 HAT1O14929 419 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 NKX2-8O15522 239 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 RAD1O60671 282 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 RASSF9O75901 435 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 KRT6AP02538 564 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 KRT6BP04259 564 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 JUNP05412 331 aaKnown RBP8.97□□□□□ -0.97
PHGDH-228ENST00000641847 FGF4P08620 206 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 TROVE2P10155 538 aaKnown RBP eCLIP8.97□□□□□ -0.97
PHGDH-228ENST00000641847 PCNAP12004 261 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 ST6GAL1P15907 406 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 POU3F2P20265 443 aaPredicted RBP8.97□□□□□ -0.97
PHGDH-228ENST00000641847 CXCR2P25025 360 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 CSTF2P33240 577 aaKnown RBP eCLIP8.97□□□□□ -0.97
PHGDH-228ENST00000641847 GRK3P35626 688 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 CASP2P42575 452 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 KRT6CP48668 564 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 HK2P52789 917 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 RAB15P59190 212 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 CBX1P83916 185 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 CDC20Q12834 499 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 HIST2H2ACQ16777 129 aaPredicted RBP8.97□□□□□ -0.97
PHGDH-228ENST00000641847 SGO1Q5FBB7 561 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 DCAF12Q5T6F0 453 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 FCRL6Q6DN72 434 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 HIST2H2AA3Q6FI13 130 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 TCTN3Q6NUS6 607 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 MED27Q6P2C8 311 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 WDR74Q6RFH5 385 aaPredicted RBP8.97□□□□□ -0.97
PHGDH-228ENST00000641847 ASB18Q6ZVZ8 466 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 MAVSQ7Z434 540 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 FAM129CQ86XR2 697 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 PLXDC1Q8IUK5 500 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 PLD3Q8IV08 490 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 SLITRK4Q8IW52 837 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.97□□□□□ -0.97
PHGDH-228ENST00000641847 CLYBLQ8N0X4 340 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 C19orf47Q8N9M1 422 aaKnown RBP8.97□□□□□ -0.97
PHGDH-228ENST00000641847 AGBL5Q8NDL9 886 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 ZNF740Q8NDX6 193 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 OR4K1Q8NGD4 311 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 CPT1CQ8TCG5 803 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 UBE2E3Q969T4 207 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 REPS1Q96D71 796 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 C19orf60Q96EN9 201 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 TRAPPC9Q96Q05 1148 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 MAP3K3Q99759 626 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 PLCD4Q9BRC7 762 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 SEMA6CQ9H3T2 930 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 PRM3Q9NNZ6 103 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 TMEM9Q9P0T7 183 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 VTI1BQ9UEU0 232 aa8.97□□□□□ -0.97
PHGDH-228ENST00000641847 SNX7Q9UNH6 387 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms