RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ETV3P41162 512 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 APLP1P51693 650 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 GABARAPL2P60520 117 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 KCNC4Q03721 635 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 TLE2Q04725 743 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 CSTF1Q05048 431 aaKnown RBP16.08■□□□□ 0.16
SCARB2-210ENST00000638567 TMEM115Q12893 351 aaPredicted RBP16.08■□□□□ 0.16
SCARB2-210ENST00000638567 LIPJQ5W064 366 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 NCEH1Q6PIU2 408 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 RANBP3LQ86VV4 465 aaPredicted RBP16.08■□□□□ 0.16
SCARB2-210ENST00000638567 CHCHD4Q8N4Q1 142 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 RGMAQ96B86 450 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 CAMK1GQ96NX5 476 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 IFT27Q9BW83 186 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 ANKHQ9HCJ1 492 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 SLCO3A1Q9UIG8 710 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 PCDHB11Q9Y5F2 797 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 PCDHGA8Q9Y5G5 932 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.16
SCARB2-210ENST00000638567 BCORQ6W2J9 1755 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 FAM172BPA6NC97 362 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 CCRL2O00421 344 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 TYRP14679 529 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 SLC36A3Q495N2 470 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 NCCRP1Q6ZVX7 275 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-210ENST00000638567 MMAAQ8IVH4 418 aaKnown RBP16.07■□□□□ 0.16
SCARB2-210ENST00000638567 SLAIN1Q8ND83 568 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 INPP5KQ9BT40 448 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 C1QTNF1Q9BXJ1 281 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 URB1O60287 2271 aaKnown RBP16.07■□□□□ 0.16
SCARB2-210ENST00000638567 ACOT8O14734 319 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 ATE1O95260 518 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 TUBB3Q13509 450 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 EXOC3L2Q2M3D2 409 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 ASB18Q6ZVZ8 466 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 GET4Q7L5D6 327 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-210ENST00000638567 ADGRG2Q8IZP9 1017 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 MDGA1Q8NFP4 955 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 OR4C6Q8NH72 309 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 LMLNQ96KR4 655 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 SPACA7Q96KW9 195 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 MGLLQ99685 303 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 MND1Q9BWT6 205 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 MAGIXQ9H6Y5 334 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 PCDHGA10Q9Y5H3 936 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 JUPP14923 745 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 ADRA1AP35348 466 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 SMSP52788 366 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 LY6G5CQ5SRR4 150 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 NT5C3BQ969T7 300 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 C14orf119Q9NWQ9 140 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 TAS2R9Q9NYW1 312 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 PLAGL1Q9UM63 463 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 MRPS33Q9Y291 106 aaKnown RBP16.07■□□□□ 0.16
SCARB2-210ENST00000638567 LAMB1P07942 1786 aa16.07■□□□□ 0.16
SCARB2-210ENST00000638567 LOC285095A0A1B0GVY8 99 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 FUOMA2VDF0 154 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 OR6C70A6NIJ9 312 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 LRRC72A6NJI9 287 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 MMP20O60882 483 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 MPIP34949 423 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 STXBP1P61764 594 aaKnown RBP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 FCHO2Q0JRZ9 810 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 ZNF155Q12901 538 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 PPIGQ13427 754 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 WSCD2Q2TBF2 565 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 ZNF783Q6ZMS7 281 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 MRPL10Q7Z7H8 261 aaKnown RBP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 CARM1Q86X55 608 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 PROKR1Q8TCW9 393 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 MAL2Q969L2 176 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 IRAK3Q9Y616 596 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 A8MV72 311 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 PLOD2O00469 737 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 SCN2BO60939 215 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 ACRP10323 421 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 CPN2P22792 545 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 ZNF45Q02386 682 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 LASP1Q14847 261 aaKnown RBP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 ALKAL1Q6UXT8 129 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 APCDD1Q8J025 514 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 APIPQ96GX9 242 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 NEUROD4Q9HD90 331 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 MRPS30Q9NP92 439 aaKnown RBP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 ACSL6Q9UKU0 697 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 APOL3O95236 402 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 LAMP1P11279 417 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 ITPKBP27987 946 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 TIA1P31483 386 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 GJA5P36382 358 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 UAP1L1Q3KQV9 507 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 LIN54Q6MZP7 749 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 ZSWIM9Q86XI8 627 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 GRPEL2Q8TAA5 225 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 SLC22A17Q8WUG5 538 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 OVCA2Q8WZ82 227 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 NAA50Q9GZZ1 169 aaKnown RBP16.06■□□□□ 0.16
SCARB2-210ENST00000638567 IL26Q9NPH9 171 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 NECTIN3Q9NQS3 549 aa16.06■□□□□ 0.16
SCARB2-210ENST00000638567 TDP1Q9NUW8 608 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms