RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 USP22Q9UPT9 525 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 DLGAP4Q9Y2H0 992 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 SNX5Q9Y5X3 404 aa11.09□□□□□ -0.63
CLN6-217ENST00000636964 CCNA2P20248 432 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 RPS14P62263 151 aaKnown RBP11.08□□□□□ -0.64
CLN6-217ENST00000636964 GRIK2Q13002 908 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 COL13A1Q5TAT6 717 aaPredicted RBP11.08□□□□□ -0.64
CLN6-217ENST00000636964 AGAP7PQ5VUJ5 663 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 GTF2IRD2BQ6EKJ0 949 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 GTF2IRD2Q86UP8 949 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 PSD4Q8NDX1 1056 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 ZNF480Q8WV37 535 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 APIPQ96GX9 242 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 PPM1MQ96MI6 270 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 IL17FQ96PD4 163 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 TSSK3Q96PN8 268 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 HOPXQ9BPY8 73 aaPredicted RBP11.08□□□□□ -0.64
CLN6-217ENST00000636964 SLC29A3Q9BZD2 475 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 EPHX3Q9H6B9 360 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 FZD3Q9NPG1 666 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 LEF1Q9UJU2 399 aaPredicted RBP11.08□□□□□ -0.64
CLN6-217ENST00000636964 DGKBQ9Y6T7 804 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 YKT6O15498 198 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 MYO1DO94832 1006 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 LRATO95237 230 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 BCKDHAP12694 445 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 COL9A1P20849 921 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 C5AR1P21730 350 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 TACR1P25103 407 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 CTHP32929 405 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 PTGS2P35354 604 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 MTHFRP42898 656 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 HTR4Q13639 388 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 ENPP2Q13822 863 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 FAM174BQ3ZCQ3 159 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 FRG2Q64ET8 278 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 ERMP1Q7Z2K6 904 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 KIAA2013Q8IYS2 634 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 L3MBTL4Q8NA19 623 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 IL17RCQ8NAC3 791 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 BPIFB6Q8NFQ5 453 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 EFHD2Q96C19 240 aaPredicted RBP11.08□□□□□ -0.64
CLN6-217ENST00000636964 FRG2BQ96QU4 278 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 DPY30Q9C005 99 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 KLHL25Q9H0H3 589 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 NTN4Q9HB63 628 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 ASF1AQ9Y294 204 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 TMEM5Q9Y2B1 443 aa11.08□□□□□ -0.64
CLN6-217ENST00000636964 IFRD1O00458 451 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 EEDO75530 441 aaKnown RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 KLF8O95600 359 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 KIAA0040Q15053 153 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TCEA2Q15560 299 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 CACHD1Q5VU97 1274 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 USP43Q70EL4 1123 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 RALGPS2Q86X27 583 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 MINDY1Q8N5J2 469 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 APOLD1Q96LR9 279 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 EBPLQ9BY08 206 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 POLE4Q9NR33 117 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 SH2B3Q9UQQ2 575 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 MGAT4DA6NG13 374 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 SEC14L2O76054 403 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 ADH1BP00325 375 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 NTSR1P30989 418 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 PPP2R2BQ00005 443 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 IRF4Q15306 451 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 SMU1Q2TAY7 513 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 CYBRD1Q53TN4 286 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TMEM31Q5JXX7 168 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 SPANXN4Q5MJ08 99 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 CATSPEREQ5SY80 951 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 ZNF776Q68DI1 518 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 MTSS1LQ765P7 747 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 AMZ2Q86W34 360 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 OR5AR1Q8NGP9 310 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 OR2L2Q8NH16 312 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 NEIL2Q969S2 332 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 FKBP10Q96AY3 582 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 PPWD1Q96BP3 646 aaKnown RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 COX14Q96I36 57 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 MSLNLQ96KJ4 702 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 LHPPQ9H008 270 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 CD93Q9NPY3 652 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 AKIP1Q9NQ31 210 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TNRC18O15417 2968 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3DA0A087WVF3 549 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3IA0A087WXS9 549 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3EA0A087X179 549 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3KA0A087X1G2 549 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3FA6NER0 549 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3LB9A6J9 549 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 KPNA4O00629 521 aaPredicted RBP11.07□□□□□ -0.64
CLN6-217ENST00000636964 VEGFDO43915 354 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 B3GALT4O96024 378 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 TBC1D3HP0C7X1 549 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 HOXB2P14652 356 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 JUPP14923 745 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 CD72P21854 359 aa11.07□□□□□ -0.64
CLN6-217ENST00000636964 ELK4P28324 431 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms