RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 NUAK1O60285 661 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 ADRA2AP08913 450 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 JUNDP17535 347 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 TGM1P22735 817 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 RECQLP46063 649 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 ITGA1P56199 1179 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 IL18R1Q13478 541 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 DOC2BQ14184 412 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 MPPE1Q53F39 396 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 STEAP3Q658P3 488 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 TMEM220Q6QAJ8 160 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 PRSS48Q7RTY5 328 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 CFAP206Q8IYR0 622 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 TMEM175Q9BSA9 504 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 NECTIN3Q9NQS3 549 aa13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 SCHIP1Q9P0W5 487 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-228ENST00000636610 TMEM229AB2RXF0 380 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 GFYI3L273 518 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 RFPL2O75678 378 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 KLK1P06870 262 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 IDSP22304 550 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 SERPINB1P30740 379 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CCR2P41597 374 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 NR4A2P43354 598 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ALDH9A1P49189 494 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 DEFB103AP81534 67 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ARMCX4Q5H9R4 360 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 TNFAIP8L2Q6P589 184 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ZNF605Q86T29 641 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 SYNPOQ8N3V7 929 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 RASGEF1AQ8N9B8 481 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 C11orf65Q8NCR3 313 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 VPS37AQ8NEZ2 397 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CLP1Q92989 425 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CCM2Q9BSQ5 444 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 RUVBL1Q9Y265 456 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 TMEM221A6NGB7 291 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 A6NL46 340 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 H3BM21 787 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 RGS5O15539 181 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 SGTAO43765 313 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CNOT3O75175 753 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CBSLP0DN79 551 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 AZGP1P25311 298 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 IMPA1P29218 277 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CBSP35520 551 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 HNMTP50135 292 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 TAS2R50P59544 299 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 NKX3-2P78367 333 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 C2orf80Q0P641 193 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 MTAPQ13126 283 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 SLC5A12Q1EHB4 618 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 PRSS53Q2L4Q9 553 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 TRAPPC5Q8IUR0 188 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CRIPAKQ8N1N5 446 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CELF5Q8N6W0 485 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 OR52E4Q8NGH9 312 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 FIBINQ8TAL6 211 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 FBLIM1Q8WUP2 373 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 S100ZQ8WXG8 99 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 RAB8BQ92930 207 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 TSEN34Q9BSV6 310 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 DOHHQ9BU89 302 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 SIAEQ9HAT2 523 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 EXO1Q9UQ84 846 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ANAPC1Q9H1A4 1944 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 MYO9BQ13459 2157 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 HOXA2O43364 376 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 TGM5O43548 720 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 PRAMEF10O60809 474 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 APOL3O95236 402 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 TM4SF4P48230 202 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 SFSWAPQ12872 951 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 IQCCQ4KMZ1 466 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ZNF697Q5TEC3 545 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 GDPD4Q6W3E5 623 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 CBARPQ8N350 705 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 OR2A12Q8NGT7 310 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 VANGL1Q8TAA9 524 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 SLC38A4Q969I6 547 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ZNF566Q969W8 418 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ABCG4Q9H172 646 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 ERVK13-1Q9NX77 482 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 STOML2Q9UJZ1 356 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 B3GNT3Q9Y2A9 372 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 TMED5Q9Y3A6 229 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 PCDHGB3Q9Y5G1 929 aa13.48□□□□□ -0.25
CACNA1A-228ENST00000636610 AGAP14A8MT82 685 aa13.47□□□□□ -0.25
CACNA1A-228ENST00000636610 K7ESM1 405 aa13.47□□□□□ -0.25
CACNA1A-228ENST00000636610 CTDSP2O14595 271 aa13.47□□□□□ -0.25
CACNA1A-228ENST00000636610 POP4O95707 220 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-228ENST00000636610 LRG1P02750 347 aa13.47□□□□□ -0.25
CACNA1A-228ENST00000636610 ACVR2AP27037 513 aa13.47□□□□□ -0.25
CACNA1A-228ENST00000636610 SCARB2Q14108 478 aa13.47□□□□□ -0.25
CACNA1A-228ENST00000636610 SLBPQ14493 270 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1A-228ENST00000636610 SMU1Q2TAY7 513 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms