RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ZNF79Q15937 498 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 DUSP7Q16829 419 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 CPTPQ5TA50 214 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 LINGO4Q6UY18 593 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 PTCHD4Q6ZW05 846 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 ZNF280BQ86YH2 543 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 PEX5LQ8IYB4 626 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 NXPE1Q8N323 547 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 VWA5B2Q8N398 1253 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 SH3KBP1Q96B97 665 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 OPALINQ96PE5 141 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 ZNF282Q9UDV7 671 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 CMAHPQ9Y471 501 aa14.25□□□□□ -0.13
CACNA1A-220ENST00000635988 A0A1W2PQ09 198 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 SCAMP2O15127 329 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 UGDHO60701 494 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 IGHA2P01877 340 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 HLA-EP13747 358 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 AOAHP28039 575 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 MZF1P28698 734 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 SPAM1P38567 509 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 ACSM2AQ08AH3 577 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 RBBP4Q09028 425 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 TP53BP2Q13625 1128 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 PTGES3Q15185 160 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 BAK1Q16611 211 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 PTCHD3Q3KNS1 767 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 FAM209AQ5JX71 171 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 MEDAGQ5VYS4 303 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 ACSM2BQ68CK6 577 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 SYCE2Q6PIF2 218 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 TRAF7Q6Q0C0 670 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 NPAS3Q8IXF0 933 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 RDH10Q8IZV5 341 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 CACTIN-AS1Q8N1I8 211 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 CBARPQ8N350 705 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 FAM181AQ8N9Y4 354 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 OR52J3Q8NH60 311 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 PLD4Q96BZ4 506 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 AFF4Q9UHB7 1163 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 BOLA1Q9Y3E2 137 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 ARRDC5A6NEK1 342 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 ZNF670-ZNF695F2Z2N8 137 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 B4GALT3O60512 393 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 MYCP01106 439 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 ALPPP05187 535 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 ERP29P30040 261 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 CSTF2P33240 577 aaKnown RBP eCLIP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 SLAMF1Q13291 335 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 CHRNA6Q15825 494 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 LIPJQ5W064 366 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 XKRXQ6PP77 449 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 USP50Q70EL3 339 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 CAMKMTQ7Z624 323 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 DEFB132Q7Z7B7 95 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 BBS7Q8IWZ6 715 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 C1orf52Q8N6N3 182 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 GDPD1Q8N9F7 314 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 OR9Q1Q8NGQ5 310 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 MAL2Q969L2 176 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 BARHL1Q9BZE3 327 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 HHATLQ9HCP6 504 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 ABCB8Q9NUT2 735 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 STUB1Q9UNE7 303 aa14.24□□□□□ -0.13
CACNA1A-220ENST00000635988 ZAR1LA6NP61 321 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 TFECO14948 347 aaPredicted RBP14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 SEC14L5O43304 696 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 GCM2O75603 506 aaPredicted RBP14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 IFNA14P01570 189 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 HMGA2P52926 109 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 PTPN5P54829 565 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 ARPP19P56211 112 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 SMARCB1Q12824 385 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 HYAL2Q12891 473 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 CHIT1Q13231 466 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 CXorf57Q6NSI4 855 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 KIAA1841Q6NSI8 718 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 LIX1LQ8IVB5 337 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 NAGSQ8N159 534 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 FAM46DQ8NEK8 389 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 CDC26Q8NHZ8 85 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 FRMD6Q96NE9 622 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 PIP5K1AQ99755 562 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 ARPC5LQ9BPX5 153 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 PLSCR3Q9NRY6 295 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 ACOXLQ9NUZ1 547 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 OGDHLQ9ULD0 1010 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 PRG3Q9Y2Y8 225 aaPredicted RBP14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 MTMR11A4FU01 709 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 YY2O15391 372 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 ARHGEF9O43307 516 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 BPIP17213 487 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 ATF6P18850 670 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 MYL9P24844 172 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 ITGB7P26010 798 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 MRPL58Q14197 206 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 FAM92BQ6ZTR7 304 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 LAX1Q8IWV1 398 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 ADGRG2Q8IZP9 1017 aa14.23□□□□□ -0.13
CACNA1A-220ENST00000635988 GEMIN6Q8WXD5 167 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms