RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 DFNA5O60443 496 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CDH1P12830 882 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 NPPBP16860 134 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF26P17031 533 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 GGT1P19440 569 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CXCR2P25025 360 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 NTSR1P30989 418 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 HPCAL1P37235 193 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 RPL3P39023 403 aaKnown RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TBPL1P62380 186 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CD83Q01151 205 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 C19orf57Q0VDD7 668 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CCSMST1Q4G0I0 132 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TMTC4Q5T4D3 741 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 NAIF1Q69YI7 327 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 WDR73Q6P4I2 378 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 OVCH2Q7RTZ1 564 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 AMIGO2Q86SJ2 522 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 RALGPS2Q86X27 583 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 KRT78Q8N1N4 520 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 OXR1Q8N573 874 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CLHC1Q8NHS4 586 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 GANCQ8TET4 914 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 SLC5A11Q8WWX8 675 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TFGQ92734 400 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 FGF14Q92915 247 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF597Q96LX8 424 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF583Q96ND8 569 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 NECTIN4Q96NY8 510 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 BDH2Q9BUT1 245 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 SPATA9Q9BWV2 254 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TEX101Q9BY14 249 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 OR52A5Q9H2C5 316 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 SEMA6AQ9H2E6 1030 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 GHITMQ9H3K2 345 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 WDR26Q9H7D7 661 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 COQ10BQ9H8M1 238 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 AGPAT4Q9NRZ5 378 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 SIRT5Q9NXA8 310 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 VAPAQ9P0L0 249 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 SPATA7Q9P0W8 599 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 GMPR2Q9P2T1 348 aaKnown RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 GULP1Q9UBP9 304 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 SCML1Q9UN30 329 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TMEM98Q9Y2Y6 226 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TSC22D4Q9Y3Q8 395 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 AP4B1Q9Y6B7 739 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CHD9Q3L8U1 2897 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 DENND4AQ7Z401 1863 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 FAM220BPB1ANY3 271 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 RFXANKO14593 260 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 LDLRP01130 860 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 UBTFL6P0CB48 400 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CD22P20273 847 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TIE1P35590 1138 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TRIM23P36406 574 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 WASP42768 502 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 PPP5CP53041 499 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 OR4D2P58180 307 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 MTPNP58546 118 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TAP2Q03519 686 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 PRKCQQ04759 706 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CHRNB3Q05901 458 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 MTAPQ13126 283 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 DDX39BQ13838 428 aaKnown RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 EFR3AQ14156 821 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 NFE2L1Q14494 772 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 SSPNQ14714 243 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CYP2A13Q16696 494 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TIGD6Q17RP2 521 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 DUOXA1Q1HG43 343 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 INAVAQ3KP66 663 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 THEMIS2Q5TEJ8 643 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 METRNLQ641Q3 311 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CAPRIN2Q6IMN6 1127 aaKnown RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 DOK6Q6PKX4 331 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 LCTLQ6UWM7 567 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 MEX3BQ6ZN04 569 aaKnown RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TMPRSS11BQ86T26 416 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 LAS2Q8IYD9 372 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 SYNPOQ8N3V7 929 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 PLA2G15Q8NCC3 412 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 ZBTB44Q8NCP5 570 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 OR8J2Q8NGG1 315 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CHTF18Q8WVB6 975 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 NEIL2Q969S2 332 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 CXorf40BQ96DE9 158 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 FAM120BQ96EK7 910 aaKnown RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 HSPBAP1Q96EW2 488 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 HHIPQ96QV1 700 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 FERD3LQ96RJ6 166 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 MTERF1Q99551 399 aaKnown RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 PAIP1Q9H074 479 aaKnown RBP6.88□□□□□ -1.31
BRCA1-230ENST00000634433 PCDHB14Q9Y5E9 798 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TRBV5-3A0A0A0MS03 114 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 A0A1W2PP55 124 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 K7EQS6 105 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 E2F6O75461 281 aa6.87□□□□□ -1.31
BRCA1-230ENST00000634433 ANXA4P09525 319 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms