RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 GLRA4Q5JXX5 417 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 KLHL10Q6JEL2 608 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 C17orf107Q6ZR85 190 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 LINC00696Q6ZRV3 163 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 KCTD9Q7L273 389 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 TRMT11Q7Z4G4 463 aaKnown RBP3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 C5orf24Q7Z6I8 188 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 CCDC185Q8N715 623 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 OMA1Q96E52 524 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 ZNF559Q9BR84 538 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 TRIM51Q9BSJ1 452 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 UBAC1Q9BSL1 405 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 SLC5A7Q9GZV3 580 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 UPF3AQ9H1J1 476 aaKnown RBP3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 C2orf40Q9H1Z8 148 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 CWC25Q9NXE8 425 aaPredicted RBP3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 SATB2Q9UPW6 733 aa3.81□□□□□ -1.8
GPCPD1-207ENST00000633552 RNF123Q5XPI4 1314 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 SDR42E2A6NKP2 422 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 MAGEB2O15479 319 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 SCO2O43819 266 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 ACSL4O60488 711 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 LETM1O95202 739 aaPredicted RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 SLC16A8O95907 504 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 RPLP0P05388 317 aaKnown RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 TRIM49P0CI25 452 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 TRIM49CP0CI26 452 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 GIFP27352 417 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 CTNNB1P35222 781 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 SERPINB6P35237 376 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 CLK1P49759 484 aaKnown RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 HUNKP57058 714 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 OR1D5P58170 312 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 BTG1P62324 171 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 RPP38P78345 283 aaKnown RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 ASIC1P78348 528 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 IRX1P78414 480 aaPredicted RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 CYCSP99999 105 aaKnown RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 MTF1Q14872 753 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 KBTBD12Q3ZCT8 623 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 FAM106AQ4KMX7 169 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 Q6ZRP5 223 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 C15orf52Q6ZUT6 534 aaKnown RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 Q71RC1 249 aaPredicted RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 COX8CQ7Z4L0 72 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 TDHQ8IZJ6 230 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 C10orf53Q8N6V4 93 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 ATP8B4Q8TF62 1192 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 CHURC1Q8WUH1 139 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 SLCO2A1Q92959 643 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 KRT12Q99456 494 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 MCRIP2Q9BUT9 160 aaKnown RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 HOXD1Q9GZZ0 328 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 C5orf66Q9H5L9 145 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 MED20Q9H944 212 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 RNPEPL1Q9HAU8 725 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 NLGN3Q9NZ94 848 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 TRPC4Q9UBN4 977 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 BAIAP2L1Q9UHR4 511 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 LEF1Q9UJU2 399 aaPredicted RBP3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 LIPT1Q9Y234 373 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 TMED7Q9Y3B3 224 aa3.8□□□□□ -1.8
GPCPD1-207ENST00000633552 ARID2Q68CP9 1835 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 PFASO15067 1338 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 SMIM30A4D0T7 59 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 LRRD1A4D1F6 860 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 ANTXRLA6NF34 631 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 TCP10L2B9ZVM9 353 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 B4GAT1O43505 415 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 NME6O75414 186 aaPredicted RBP3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 PDHA2P29803 388 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 SRD5A2P31213 254 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 MAGEB1P43366 347 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 STX1BP61266 288 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 FKBP1BP68106 108 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 IRX4P78413 519 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 SLC3A1Q07837 685 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 TRA2AQ13595 282 aaKnown RBP eCLIP3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 MTHFSDQ2M296 383 aaKnown RBP3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 ZNF770Q6IQ21 691 aaPredicted RBP3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 SLC27A4Q6P1M0 643 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 IYDQ6PHW0 289 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 SIGLEC15Q6ZMC9 328 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 KIF6Q6ZMV9 814 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 LRRTM1Q86UE6 522 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 CATSPERDQ86XM0 798 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 ZC3H3Q8IXZ2 948 aaKnown RBP3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 NUP37Q8NFH4 326 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 SPATA3Q8NHX4 192 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 SEPT8Q92599 483 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 AGAP3Q96P47 875 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 IWS1Q96ST2 819 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 PCDHB18PQ96TA0 734 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 MTHFD2LQ9H903 347 aaPredicted RBP3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 GPR173Q9NS66 373 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 CNIH4Q9P003 139 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 TMEM181Q9P2C4 612 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 MYH15Q9Y2K3 1946 aa3.79□□□□□ -1.8
GPCPD1-207ENST00000633552 hCG_38984A0A1B0GV85 526 aa3.78□□□□□ -1.8
GPCPD1-207ENST00000633552 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms