RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 ATOH8Q96SQ7 321 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 SPATA9Q9BWV2 254 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 ZCCHC3Q9NUD5 404 aaKnown RBP17.1■□□□□ 0.33
FARP1-242ENST00000627049 ABCG2Q9UNQ0 655 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 GRM6O15303 877 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 RBBP4Q09028 425 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 CBX2Q14781 532 aaPredicted RBP17.1■□□□□ 0.33
FARP1-242ENST00000627049 EIF4HQ15056 248 aaKnown RBP17.1■□□□□ 0.33
FARP1-242ENST00000627049 ATAT1Q5SQI0 421 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 OAFQ86UD1 273 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 RNF130Q86XS8 419 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 GALNT13Q8IUC8 556 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 HEBP1Q9NRV9 189 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 CFAP97Q9P2B7 532 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 KDM4BO94953 1096 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 GABARAPO95166 117 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 POLR2IP36954 125 aaKnown RBP17.1■□□□□ 0.33
FARP1-242ENST00000627049 PPP2R2BQ00005 443 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 REEP3Q6NUK4 255 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 GPR150Q8NGU9 434 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 IGSF8Q969P0 613 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 HYLS1Q96M11 299 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 C16orf70Q9BSU1 422 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 EXTL2Q9UBQ6 330 aa17.1■□□□□ 0.33
FARP1-242ENST00000627049 S100A6P06703 90 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 NFE2L1Q14494 772 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 PCBP2Q15366 365 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■■□ 21.1
FARP1-242ENST00000627049 FNDC3BQ53EP0 1204 aaKnown RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 DUS1LQ6P1R4 473 aaKnown RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 TMEM220Q6QAJ8 160 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 ARL9Q6T311 187 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 PTRH1Q86Y79 214 aaKnown RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 LMAN2LQ9H0V9 348 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 RNF121Q9H920 327 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 GKN1Q9NS71 199 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 NLKQ9UBE8 527 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 PI15O43692 258 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 KLK1P06870 262 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 ANXA3P12429 323 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 C18orf21Q32NC0 220 aaPredicted RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 LINC00299Q6ZSB3 139 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 BEND7Q8N7W2 519 aaPredicted RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 ASB15Q8WXK1 588 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 SLCO4A1Q96BD0 722 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 UHRF1Q96T88 793 aaPredicted RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 P2RX2Q9UBL9 471 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 CROCCQ5TZA2 2017 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 HLA-DQA2P01906 255 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 CSKP41240 450 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 CCR4P51679 360 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 CXorf40AQ8TE69 158 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 DUS3LQ96G46 650 aaKnown RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 CCM2Q9BSQ5 444 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 MMP28Q9H239 520 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 RGS17Q9UGC6 210 aaPredicted RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 MLXQ9UH92 298 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 EXOSC1Q9Y3B2 195 aaKnown RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 MEIOCA2RUB1 952 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 FAM25EA8MYX2 175 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 L7N2F9 121 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 FAM189BP81408 668 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 GINS1Q14691 196 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 SNAP47Q5SQN1 464 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 USP50Q70EL3 339 aaPredicted RBP17.09■□□□□ 0.33
FARP1-242ENST00000627049 PPP1R16AQ96I34 528 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 TRIB3Q96RU7 358 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 BTBD1Q9H0C5 482 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 ARNT2Q9HBZ2 717 aa17.09■□□□□ 0.33
FARP1-242ENST00000627049 HMX3A6NHT5 357 aa17.08■□□□□ 0.33
FARP1-242ENST00000627049 M0R233 179 aa17.08■□□□□ 0.33
FARP1-242ENST00000627049 CAPN5O15484 640 aaPredicted RBP17.08■□□□□ 0.33
FARP1-242ENST00000627049 CELP19835 753 aa17.08■□□□□ 0.33
FARP1-242ENST00000627049 PRR5P85299 388 aa17.08■□□□□ 0.33
FARP1-242ENST00000627049 RHAGQ02094 409 aa17.08■□□□□ 0.33
FARP1-242ENST00000627049 GPR149Q86SP6 731 aa17.08■□□□□ 0.33
FARP1-242ENST00000627049 PHYKPLQ8IUZ5 450 aa17.08■□□□□ 0.33
FARP1-242ENST00000627049 SARDHQ9UL12 918 aa17.08■□□□□ 0.33
FARP1-242ENST00000627049 KHKP50053 298 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 SELPLGQ14242 412 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 SMN1Q16637 294 aaKnown RBP17.08■□□□□ 0.32
FARP1-242ENST00000627049 STEAP3Q658P3 488 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 FUT10Q6P4F1 479 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 NCEH1Q6PIU2 408 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 GDPGP1Q6ZNW5 385 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
FARP1-242ENST00000627049 MOSPD2Q8NHP6 518 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 NEIL3Q8TAT5 605 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 RFT1Q96AA3 541 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 SLC9A3R1O14745 358 aaPredicted RBP17.08■□□□□ 0.32
FARP1-242ENST00000627049 SLC19A2O60779 497 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 MTX2O75431 263 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 JRKO75564 520 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 SERPINA3P01011 423 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 GABRR2P28476 465 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 C21orf33P30042 268 aaPredicted RBP17.08■□□□□ 0.32
FARP1-242ENST00000627049 PRKCDQ05655 676 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 BCL7AQ4VC05 210 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 GARNL3Q5VVW2 1013 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 CES4AQ5XG92 561 aa17.08■□□□□ 0.32
FARP1-242ENST00000627049 DHRS4L2Q6PKH6 230 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms