RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 RTCAO00442 366 aaKnown RBP3.56□□□□□ -1.84
CDR1-202ENST00000625883 LETM1O95202 739 aaPredicted RBP3.56□□□□□ -1.84
CDR1-202ENST00000625883 PNPP00491 289 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 NR0B1P51843 470 aaKnown RBP3.56□□□□□ -1.84
CDR1-202ENST00000625883 XGP55808 180 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 UCP2P55851 309 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 NPRL3Q12980 569 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 SGCGQ13326 291 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 CDH18Q13634 790 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 EFTUD2Q15029 972 aaKnown RBP eCLIP3.56□□□□□ -1.84
CDR1-202ENST00000625883 PPA1Q15181 289 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 ACKR1Q16570 336 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 DUSP5Q16690 384 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 PWWP2BQ6NUJ5 590 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 HOGA1Q86XE5 327 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 LAX1Q8IWV1 398 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 RAB42Q8N4Z0 105 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 TCEANCQ8N8B7 351 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 CLEC1AQ8NC01 280 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 DDHD1Q8NEL9 900 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 CD99L2Q8TCZ2 262 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 FAM46BQ96A09 425 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 FBXO17Q96EF6 278 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 C5orf30Q96GV9 206 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 ZNF486Q96H40 463 aaPredicted RBP3.56□□□□□ -1.84
CDR1-202ENST00000625883 GMPPAQ96IJ6 420 aaPredicted RBP3.56□□□□□ -1.84
CDR1-202ENST00000625883 NYXQ9GZU5 481 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 AKIRIN1Q9H9L7 192 aaPredicted RBP3.56□□□□□ -1.84
CDR1-202ENST00000625883 DBNDD1Q9H9R9 158 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 ATAD3AQ9NVI7 634 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 SATB2Q9UPW6 733 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 NCKAP1Q9Y2A7 1128 aa3.56□□□□□ -1.84
CDR1-202ENST00000625883 NOTCH4Q99466 2003 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 MEIOCA2RUB1 952 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 GTPBP10A4D1E9 387 aaKnown RBP3.55□□□□□ -1.84
CDR1-202ENST00000625883 C15orf61A6NNL5 157 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 ZNF732B4DXR9 585 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 VEGFDO43915 354 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 CLCN4P51793 760 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 PAX9P55771 341 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 YBEYP58557 167 aaPredicted RBP3.55□□□□□ -1.84
CDR1-202ENST00000625883 SLC34A1Q06495 639 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 GRB14Q14449 540 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 TAB1Q15750 504 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 CDC37Q16543 378 aaPredicted RBP3.55□□□□□ -1.84
CDR1-202ENST00000625883 IFI44LQ53G44 452 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 ARHGAP11AQ6P4F7 1023 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 ALKBH5Q6P6C2 394 aaKnown RBP3.55□□□□□ -1.84
CDR1-202ENST00000625883 Q6ZRP5 223 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 TEX26Q8N6G2 289 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 TMEM99Q8N816 258 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 WDR13Q9H1Z4 485 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 CYP39A1Q9NYL5 469 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 MIS18AQ9NYP9 233 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 POMT2Q9UKY4 750 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 KNSTRNQ9Y448 316 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 NPHP3Q7Z494 1330 aa3.55□□□□□ -1.84
CDR1-202ENST00000625883 SERINC4A6NH21 518 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 CACNB4O00305 520 aaPredicted RBP3.54□□□□□ -1.84
CDR1-202ENST00000625883 ZFAND5O76080 213 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 CLDN1O95832 211 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 PRKAR1AP10644 381 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 HLA-DPA1P20036 260 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 AADACP22760 399 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 OPRL1P41146 370 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 SNRPD1P62314 119 aaKnown RBP3.54□□□□□ -1.84
CDR1-202ENST00000625883 SLC3A1Q07837 685 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 ITGA9Q13797 1035 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 MTF1Q14872 753 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 STXBP2Q15833 593 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 TMEM30BQ3MIR4 351 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 FGD3Q5JSP0 725 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 FIP1L1Q6UN15 594 aaKnown RBP3.54□□□□□ -1.84
CDR1-202ENST00000625883 C17orf107Q6ZR85 190 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 C15orf52Q6ZUT6 534 aaKnown RBP3.54□□□□□ -1.84
CDR1-202ENST00000625883 TRMT11Q7Z4G4 463 aaKnown RBP3.54□□□□□ -1.84
CDR1-202ENST00000625883 ZNF329Q86UD4 541 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 CATSPERDQ86XM0 798 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 TMEM126BQ8IUX1 230 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 SERPINA12Q8IW75 414 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 UBE2Q2Q8WVN8 375 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 ARHGAP45Q92619 1136 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 GGHQ92820 318 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 CASP10Q92851 521 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 LURAP1Q96LR2 239 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 TRIM7Q9C029 511 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 ZDHHC6Q9H6R6 413 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 MAGEF1Q9HAY2 307 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 PLCXD1Q9NUJ7 323 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 POLKQ9UBT6 870 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 CACNG5Q9UF02 275 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 APPL1Q9UKG1 709 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 ZNF510Q9Y2H8 683 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 MRPS28Q9Y2Q9 187 aaKnown RBP3.54□□□□□ -1.84
CDR1-202ENST00000625883 SELENOKQ9Y6D0 94 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 NEDD4P46934 1319 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 CCDC162PA2VCL2 907 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 SRRM4A7MD48 611 aaKnown RBP3.54□□□□□ -1.84
CDR1-202ENST00000625883 M0R296 226 aa3.54□□□□□ -1.84
CDR1-202ENST00000625883 SLC1A7O00341 560 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms