RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TAF4O00268 1085 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 KPNA5O15131 536 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 ZW10O43264 779 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 OR56A5P0C7T3 313 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 AP1S1P61966 158 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 MTAPQ13126 283 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 ERICH5Q6P6B1 374 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 OTOP2Q7RTS6 562 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 LRRC70Q7Z2Q7 622 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 AUTS2Q8WXX7 1259 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 TTYH2Q9BSA4 534 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 KLF16Q9BXK1 252 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 GPATCH2Q9NW75 528 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 RAB23Q9ULC3 237 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 UGT2A1Q9Y4X1 527 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 OR51B4Q9Y5P0 310 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 CFAP20Q9Y6A4 193 aaKnown RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 GJA1P17302 382 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 CA8P35219 290 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 HBA1P69905 142 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 IRF3Q14653 427 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 PTGES3Q15185 160 aaKnown RBP15.16■□□□□ 0.02
NPHP4-211ENST00000622020 TRIM60Q495X7 471 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 ZNF385BQ569K4 471 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 RETSATQ6NUM9 610 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 IL17RDQ8NFM7 739 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 TET1Q8NFU7 2136 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 EFHD2Q96C19 240 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-211ENST00000622020 CASD1Q96PB1 797 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 PKP4Q99569 1192 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 SNTG1Q9NSN8 517 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 CLEC2DQ9UHP7 191 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 MUTYHQ9UIF7 546 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 N6AMT1Q9Y5N5 214 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 AOC2O75106 756 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 C6orf47O95873 294 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 SOAT1P35610 550 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 SLC15A1P46059 708 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 SELENOWP63302 87 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 PTCHD4Q6ZW05 846 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 C11orf65Q8NCR3 313 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 ALG14Q96F25 216 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 COL21A1Q96P44 957 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 TRNT1Q96Q11 434 aaKnown RBP15.16■□□□□ 0.02
NPHP4-211ENST00000622020 FAM129BQ96TA1 746 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 SDHCQ99643 169 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-211ENST00000622020 EPYCQ99645 322 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 C2orf49Q9BVC5 232 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-211ENST00000622020 SMG9Q9H0W8 520 aaKnown RBP15.16■□□□□ 0.02
NPHP4-211ENST00000622020 MMP28Q9H239 520 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 BRD9Q9H8M2 597 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 ZNF556Q9HAH1 456 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 TMPRSS11EQ9UL52 423 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 PCDHGA2Q9Y5H1 932 aa15.16■□□□□ 0.02
NPHP4-211ENST00000622020 RFXAPO00287 272 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 ARHGAP33O14559 1287 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 FHP07954 510 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 JUPP14923 745 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 SOX6P35712 828 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 UGT2B10P36537 528 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 BDKRB1P46663 353 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 SLC6A12P48065 614 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 ZNF45Q02386 682 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 CSTF3Q12996 717 aaKnown RBP15.15■□□□□ 0.02
NPHP4-211ENST00000622020 IRF5Q13568 498 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 LRRC26Q2I0M4 334 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 C11orf74Q86VG3 221 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 THOC6Q86W42 341 aaKnown RBP15.15■□□□□ 0.02
NPHP4-211ENST00000622020 NPAS3Q8IXF0 933 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 L3MBTL4Q8NA19 623 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 GPR151Q8TDV0 419 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 FCGR1BQ92637 280 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 TMEM203Q969S6 136 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 VPS35Q96QK1 796 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 TTLL2Q9BWV7 592 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 PRRG3Q9BZD7 231 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 CWH43Q9H720 699 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 PLSCR3Q9NRY6 295 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 PCDHGA3Q9Y5H0 932 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 GPX5O75715 221 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 PTTG1O95997 202 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 MYCP01106 439 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-211ENST00000622020 TNFSF8P32971 234 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 DEFA1P59665 94 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 DEFA3P59666 94 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 RPS26P62854 115 aaKnown RBP15.15■□□□□ 0.02
NPHP4-211ENST00000622020 NKX3-2P78367 333 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 GPR33Q49SQ1 333 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 TMC5Q6UXY8 1006 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 GALNT13Q8IUC8 556 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 MMP21Q8N119 569 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 AQP11Q8NBQ7 271 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 CDK5RAP1Q96SZ6 601 aaKnown RBP15.15■□□□□ 0.02
NPHP4-211ENST00000622020 ZIC5Q96T25 663 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 GABARAPL3Q9BY60 117 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 TMEM161AQ9NX61 479 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 DNAJC27Q9NZQ0 273 aa15.15■□□□□ 0.02
NPHP4-211ENST00000622020 DNMT3AQ9Y6K1 912 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-211ENST00000622020 PRAMEF33A0A0G2JMD5 474 aa15.14■□□□□ 0.01
NPHP4-211ENST00000622020 SCAMP2O15127 329 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms