RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 WDR20Q8TBZ3 569 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 TRPC4APQ8TEL6 797 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 KIAA1143Q96AT1 154 aaPredicted RBP13.58□□□□□ -0.24
CBWD3-217ENST00000621474 MS4A6EQ96DS6 147 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 SPSB2Q99619 263 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 MECRQ9BV79 373 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 GPR87Q9BY21 358 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 CENPHQ9H3R5 247 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 ZNF304Q9HCX3 659 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 SSU72Q9NP77 194 aaKnown RBP13.58□□□□□ -0.24
CBWD3-217ENST00000621474 IFT80Q9P2H3 777 aaPredicted RBP13.58□□□□□ -0.24
CBWD3-217ENST00000621474 KCND3Q9UK17 655 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 TCFL5Q9UL49 500 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 FARSAQ9Y285 508 aaKnown RBP13.58□□□□□ -0.24
CBWD3-217ENST00000621474 TSC22D4Q9Y3Q8 395 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 ACTL7BQ9Y614 415 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 MED13Q9UHV7 2174 aa13.58□□□□□ -0.24
CBWD3-217ENST00000621474 UBFD1O14562 309 aaKnown RBP13.57□□□□□ -0.24
CBWD3-217ENST00000621474 FFAR3O14843 346 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 NKX2-8O15522 239 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 GPR42O15529 346 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 DNAJB6O75190 326 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 CREG1O75629 220 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 CLDN9O95484 217 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ZNF888P0CJ79 500 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-217ENST00000621474 CCR10P46092 362 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 EFNA3P52797 238 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 UCNP55089 124 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MAT1AQ00266 395 aaKnown RBP13.57□□□□□ -0.24
CBWD3-217ENST00000621474 RGS1Q08116 209 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MPP2Q14168 576 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 NKG7Q16617 165 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 NDUFA9Q16795 377 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 COL28A1Q2UY09 1125 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ATP1A1-AS1Q5TC04 95 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 BROXQ5VW32 411 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MLIPQ5VWP3 458 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 C19orf48Q6RUI8 117 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 OVCH1Q7RTY7 1134 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 CROCCP2Q86T23 111 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MYLK4Q86YV6 388 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-217ENST00000621474 HUS1BQ8NHY5 278 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 FKBP10Q96AY3 582 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 CCDC126Q96EE4 140 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MMABQ96EY8 250 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-217ENST00000621474 IQCGQ9H095 443 aaKnown RBP13.57□□□□□ -0.24
CBWD3-217ENST00000621474 PRORYQ9H606 182 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 TMBIM4Q9HC24 238 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 NAALAD2Q9Y3Q0 740 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ANKDD1BA6NHY2 528 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 VSTM2BA6NLU5 285 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 C9J4A7 227 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 H0YIG0 161 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 SGK494L7N484 410 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 GALR3O60755 368 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ALBP02768 609 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 UMODP07911 640 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MYZAPP0CAP1 466 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ALOX12P18054 663 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ALDH3A1P30838 453 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 NAGLUP54802 743 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 CXADRP78310 365 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 VAC14Q08AM6 782 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 DEFB134Q4QY38 66 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 VWA2Q5GFL6 755 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ARHGAP40Q5TG30 622 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 LIPMQ5VYY2 423 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 FRMD7Q6ZUT3 714 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 SYVN1Q86TM6 617 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 CCDC63Q8NA47 563 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 OR5T3Q8NGG3 340 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ADAMTS17Q8TE56 1095 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 TLCD1Q96CP7 247 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ZNF382Q96SR6 550 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MTERF1Q99551 399 aaKnown RBP13.57□□□□□ -0.24
CBWD3-217ENST00000621474 EFHD1Q9BUP0 239 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MS4A8Q9BY19 250 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 FAM117AQ9C073 453 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 MAP4K5Q9Y4K4 846 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 PCDHGA11Q9Y5H2 935 aa13.57□□□□□ -0.24
CBWD3-217ENST00000621474 ZNF860A6NHJ4 632 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 MAGEB17A8MXT2 336 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 KLHL18O94889 574 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 OR4F21O95013 312 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 ETHE1O95571 254 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 OTCP00480 354 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 PCNAP12004 261 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 FBLP22087 321 aaKnown RBP13.56□□□□□ -0.24
CBWD3-217ENST00000621474 NEK2P51955 445 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 RAB8AP61006 207 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 RPS15P62841 145 aaKnown RBP13.56□□□□□ -0.24
CBWD3-217ENST00000621474 HERC3Q15034 1050 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 ZRSR2Q15696 482 aaKnown RBP13.56□□□□□ -0.24
CBWD3-217ENST00000621474 RBBP7Q16576 425 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 HIST2H2ACQ16777 129 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-217ENST00000621474 CRTC2Q53ET0 693 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-217ENST00000621474 TOR1AIP1Q5JTV8 583 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 HIST2H2AA3Q6FI13 130 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 ATG14Q6ZNE5 492 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms