RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 AZIN1O14977 448 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 CLEC3AO75596 197 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 DXOO77932 396 aaKnown RBP12.96□□□□□ -0.33
NEK3-210ENST00000620675 DLGAP3O95886 979 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 SERPINA6P08185 405 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 SLC35G6P0C7Q6 338 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 RORAP35398 523 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 PLA2G16P53816 162 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 HMGCS1Q01581 520 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 OCRLQ01968 901 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 PWP1Q13610 501 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 GRM7Q14831 915 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 SYT16Q17RD7 645 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 ZNF385CQ66K41 422 aaPredicted RBP12.96□□□□□ -0.33
NEK3-210ENST00000620675 TLDC1Q6P9B6 456 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 CAMKVQ8NCB2 501 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 TRPV3Q8NET8 790 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 OR8K5Q8NH50 307 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 DYDC1Q8WWB3 177 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 CKAP2Q8WWK9 683 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.33
NEK3-210ENST00000620675 GATA6Q92908 595 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 NXPE2Q96DL1 559 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 CLIP3Q96DZ5 547 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 GBP5Q96PP8 586 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 ASPSCR1Q9BZE9 553 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 ACPTQ9BZG2 426 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 PITHD1Q9GZP4 211 aaPredicted RBP12.96□□□□□ -0.33
NEK3-210ENST00000620675 ELOVL6Q9H5J4 265 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 PRM3Q9NNZ6 103 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 LHX9Q9NQ69 397 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 ENAMQ9NRM1 1142 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 MARCOQ9UEW3 520 aaPredicted RBP12.96□□□□□ -0.33
NEK3-210ENST00000620675 PCDHB3Q9Y5E6 796 aa12.96□□□□□ -0.33
NEK3-210ENST00000620675 TMEM114B3SHH9 223 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 TLX3O43711 291 aaPredicted RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 ENO1P06733 434 aaKnown RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 GRK2P25098 689 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 OLR1P78380 273 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 SHC2P98077 582 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 GALNT1Q10472 559 aaPredicted RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 IFT88Q13099 833 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 SRSF6Q13247 344 aaKnown RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 ATMQ13315 3056 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 ADPRMQ3LIE5 342 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 DEFB134Q4QY38 66 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 KANK2Q63ZY3 851 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 RHBDD2Q6NTF9 364 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 ZNF793Q6ZN11 406 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 RIPOR1Q6ZS17 1223 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 TBC1D19Q8N5T2 526 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 OR5T3Q8NGG3 340 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 PPP1R36Q96LQ0 422 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 C17orf62Q9BQA9 187 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 NDC1Q9BTX1 674 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 MRPL1Q9BYD6 325 aaKnown RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 SLC29A3Q9BZD2 475 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 GIMAP2Q9UG22 337 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 ANGPTL2Q9UKU9 493 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 NUP214P35658 2090 aaPredicted RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 MED13Q9UHV7 2174 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 NUP210LQ5VU65 1888 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 SGK494L7N484 410 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 ERI3O43414 337 aaKnown RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 CPNE3O75131 537 aaKnown RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 SKAP2O75563 359 aaPredicted RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 SMIM10L1P0DMW3 83 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 UROSP10746 265 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 PIK3CBP42338 1070 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 MAT1AQ00266 395 aaKnown RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 DEPDC1Q5TB30 811 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 TMEM164Q5U3C3 297 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 IGF2-ASQ6U949 168 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 AFAP1L2Q8N4X5 818 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 TTC29Q8NA56 475 aaPredicted RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 TTLQ8NG68 377 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 OR2T11Q8NH01 316 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 UBE2E3Q969T4 207 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 SMIM10Q96HG1 83 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 C3orf30Q96M34 536 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 TEFMQ96QE5 360 aaKnown RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 ZNF717Q9BY31 904 aaPredicted RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 REXO4Q9GZR2 422 aaKnown RBP12.95□□□□□ -0.34
NEK3-210ENST00000620675 SNX6Q9UNH7 406 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 PCDHGA7Q9Y5G6 932 aa12.95□□□□□ -0.34
NEK3-210ENST00000620675 C1QTNF9BB2RNN3 333 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 MEN1O00255 615 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 PLPP1O14494 284 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 ULK1O75385 1050 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 RDH16O75452 317 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 CRCPO75575 148 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 GBAP04062 536 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 FGF4P08620 206 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 LINC00032P0C843 101 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 C1QTNF9P0C862 333 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 KITP10721 976 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 SERPINB5P36952 375 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 NAA20P61599 178 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 RGS1Q08116 209 aa12.94□□□□□ -0.34
NEK3-210ENST00000620675 KHDRBS2Q5VWX1 349 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms