RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ALG2Q9H553 416 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 ZMIZ1Q9ULJ6 1067 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 ATXN7L1Q9ULK2 861 aaPredicted RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF490Q9ULM2 529 aaPredicted RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 POLR3HQ9Y535 204 aaPredicted RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 SNX13Q9Y5W8 968 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 KIR2DS5A0A0G2JLQ3 304 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 A0A0G2JNG1 304 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 KIR2DS3K7RE56 304 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 HNRNPRO43390 633 aaKnown RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 KCNJ13O60928 360 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 GPIP06744 558 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 LINGO3P0C6S8 592 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 BMP2P12643 396 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 PRPH2P23942 346 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 KIR2DS5Q14953 304 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 NANOGP8Q6NSW7 305 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 DLEU7Q6UYE1 221 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 MBOAT1Q6ZNC8 495 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 USP53Q70EK8 1073 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 ANKFN1Q8N957 763 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 LRTOMTQ8WZ04 291 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 SH3KBP1Q96B97 665 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 AHCYL2Q96HN2 611 aaKnown RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 NANOGQ9H9S0 305 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 GMPR2Q9P2T1 348 aaKnown RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 ENTPD2Q9Y5L3 495 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 DNMT3AQ9Y6K1 912 aaPredicted RBP20.67■□□□□ 0.9
SGMS1-210ENST00000619438 CFAP47Q6ZTR5 3102 aa20.67■□□□□ 0.9
SGMS1-210ENST00000619438 KCNE1BA0A087WTH5 132 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 PABPN1LA6NDY0 278 aaKnown RBP20.66■□□□□ 0.9
SGMS1-210ENST00000619438 ARPC2O15144 300 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 PBLDP30039 288 aaPredicted RBP20.66■□□□□ 0.9
SGMS1-210ENST00000619438 FASLGP48023 281 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 LIPEQ05469 1076 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 BOP1Q14137 746 aaKnown RBP20.66■□□□□ 0.9
SGMS1-210ENST00000619438 UGT2A3Q6UWM9 527 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 C11orf96Q7Z7L8 435 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 VRK3Q8IV63 474 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 TRIM48Q8IWZ4 208 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 DNAJB14Q8TBM8 379 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 MCOLN3Q8TDD5 553 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 CANT1Q8WVQ1 401 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 TMEM74Q96NL1 305 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 HBEGFQ99075 208 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 ZBTB18Q99592 522 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 KCTD14Q9BQ13 255 aaPredicted RBP20.66■□□□□ 0.9
SGMS1-210ENST00000619438 ACTR8Q9H981 624 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 LRTM1Q9HBL6 345 aa20.66■□□□□ 0.9
SGMS1-210ENST00000619438 DHRS12A0PJE2 317 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF839A8K0R7 811 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 D6RAR5 112 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 TMX2-CTNND1H3BSU7 103 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 UMPSP11172 480 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 MAPK9P45984 424 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 CHN2P52757 468 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 RPL38P63173 70 aaKnown RBP20.65■□□□□ 0.9
SGMS1-210ENST00000619438 YBX1P67809 324 aaKnown RBP20.65■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF33BQ06732 778 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 PWP1Q13610 501 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 RTP5Q14D33 572 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 ZXDCQ2QGD7 858 aaPredicted RBP20.65■□□□□ 0.9
SGMS1-210ENST00000619438 RABL3Q5HYI8 236 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 CACHD1Q5VU97 1274 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF438Q7Z4V0 828 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF761Q86XN6 746 aaPredicted RBP20.65■□□□□ 0.9
SGMS1-210ENST00000619438 KLHDC8AQ8IYD2 350 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 FAM9CQ8IZT9 166 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 BEND7Q8N7W2 519 aaPredicted RBP20.65■□□□□ 0.9
SGMS1-210ENST00000619438 AVL9Q8NBF6 648 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 EME1Q96AY2 570 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 FBXL8Q96CD0 374 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 ZNF597Q96LX8 424 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 STRADBQ9C0K7 418 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 C1orf109Q9NX04 203 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 CPNE7Q9UBL6 633 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 SNX6Q9UNH7 406 aa20.65■□□□□ 0.9
SGMS1-210ENST00000619438 A6NCN8 305 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 FFAR3O14843 346 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 GPR42O15529 346 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 CPNE6O95741 557 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 VIPP01282 170 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 GSTM1P09488 218 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 ACPPP15309 386 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 IL10P22301 178 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 HALP42357 657 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 GSTM4Q03013 218 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 IMPG1Q17R60 797 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 C3orf38Q5JPI3 329 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 HMBOX1Q6NT76 420 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 SLC2A7Q6PXP3 512 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 PROSER1Q86XN7 944 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 PAPD5Q8NDF8 572 aaKnown RBP20.64■□□□□ 0.9
SGMS1-210ENST00000619438 OR8J3Q8NGG0 315 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 ELMO1Q92556 727 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.64■□□□□ 0.9
SGMS1-210ENST00000619438 FARSBQ9NSD9 589 aaKnown RBP20.64■□□□□ 0.9
SGMS1-210ENST00000619438 INTS7Q9NVH2 962 aaKnown RBP20.64■□□□□ 0.9
SGMS1-210ENST00000619438 FAM8A1Q9UBU6 413 aa20.64■□□□□ 0.9
SGMS1-210ENST00000619438 AP4B1Q9Y6B7 739 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms