RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 UTS2BQ765I0 119 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 C16orf62Q7Z3J2 963 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 RNF175Q8N4F7 328 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC5A8Q8N695 610 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR9A1PQ8NGU1 263 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC5A11Q8WWX8 675 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 KLK6Q92876 244 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TCEAL4Q96EI5 215 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 COG8Q96MW5 612 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 INPP5KQ9BT40 448 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 REEP4Q9H6H4 257 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF334Q9HCZ1 680 aaPredicted RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 EQTNQ9NQ60 294 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SEMA3GQ9NS98 782 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ERVK-18Q9QC07 812 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 AP3D1O14617 1153 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 NME6O75414 186 aaPredicted RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ATE1O95260 518 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 RB1P06400 928 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 MPC1LP0DKB6 136 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ACTR1BP42025 376 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ACTR1AP61163 376 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 PPP2R2BQ00005 443 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 LASP1Q14847 261 aaKnown RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC5A12Q1EHB4 618 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF404Q494X3 552 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 PYCR3Q53H96 274 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 HSD11B1LQ7Z5J1 315 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 LMNTD1Q8N9Z9 388 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 L3MBTL4Q8NA19 623 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 FCGR1BQ92637 280 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 MCCC1Q96RQ3 725 aaPredicted RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC2A11Q9BYW1 496 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 RHBGQ9H310 441 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 KCNK6Q9Y257 313 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 KLHL20Q9Y2M5 609 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 LYVE1Q9Y5Y7 322 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 CACNA1DQ01668 2161 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TTC34A8MYJ7 566 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 EFCAB9A8MZ26 197 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 CACNB4O00305 520 aaPredicted RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR7A17O14581 309 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC16A5O15375 505 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 KLK8O60259 260 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 LCKP06239 509 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 PIM1P11309 404 aaPredicted RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 LAMP2P13473 410 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 MAT2AP31153 395 aaKnown RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TBPL1P62380 186 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 DHCR24Q15392 516 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SNAPC1Q16533 368 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TIGD6Q17RP2 521 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 NAGSQ8N159 534 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TRAM1L1Q8N609 369 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 NEIL2Q969S2 332 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TESCQ96BS2 214 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 C12orf66Q96MD2 445 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 LYSMD1Q96S90 227 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TUBA1CQ9BQE3 449 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 DOHHQ9BU89 302 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TVP23BQ9NYZ1 205 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ERVW-1Q9UQF0 538 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ANKRD31Q8N7Z5 1873 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 E7EQ34 232 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SNPHO15079 494 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ERI3O43414 337 aaKnown RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCNB2O95067 398 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SRPRAP08240 638 aaKnown RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TSPAN19P0C672 248 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCL5P13501 91 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 CSNK2A2P19784 350 aaPredicted RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 HRH2P25021 359 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 HTR1BP28222 390 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 PDHA2P29803 388 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 C21orf33P30042 268 aaPredicted RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 DSTNP60981 165 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 HTRA3P83110 453 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 SCARB2Q14108 478 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 PLA2G4EQ3MJ16 856 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 IQCCQ4KMZ1 466 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 CRB2Q5IJ48 1285 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 GPR149Q86SP6 731 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 KAT2AQ92830 837 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 ISG20Q96AZ6 181 aaKnown RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 TADA1Q96BN2 335 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 CXorf40BQ96DE9 158 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 RNFT2Q96EX2 444 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 METTL2AQ96IZ6 378 aaKnown RBP5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 MGLLQ99685 303 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 C1QTNF7Q9BXJ2 289 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 C3orf14Q9HBI5 128 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 GPRC5BQ9NZH0 403 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 MED12Q93074 2177 aa5.43□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM86C2PA6NEL3 165 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 WASH3PC4AMC7 463 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 BMP7P18075 431 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CSNK1DP48730 415 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 TPTEP56180 551 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 CDK5R2Q13319 367 aa5.42□□□□□ -1.54
SYNCRIP-204ENST00000616122 KCNC3Q14003 757 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms