RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 GPR107Q5VW38 600 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 FAM205BPQ63HN1 556 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 TMCO2Q7Z6W1 182 aaPredicted RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 STEAP2Q8NFT2 490 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 OR51D1Q8NGF3 324 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 CCM2Q9BSQ5 444 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 CPEB1Q9BZB8 566 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 ZCCHC17Q9NP64 241 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 CNTNAP5Q8WYK1 1306 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 ATP10BO94823 1461 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 TGFB1P01137 390 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 EPCAMP16422 314 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 AZGP1P25311 298 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 RAB11BQ15907 218 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 SPDYCQ5MJ68 293 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 C9orf57Q5W0N0 161 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 CASKIN2Q8WXE0 1202 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 C3orf49Q96BT1 292 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 MBOAT7Q96N66 472 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 TAC3Q9UHF0 121 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 YARS2Q9Y2Z4 477 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 MAGI2Q86UL8 1455 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 FLRT2O43155 660 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 ZMPSTE24O75844 475 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 AMY2BP19961 511 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 TNFSF9P41273 254 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 ZACNQ401N2 412 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 HTRA1Q92743 480 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 TAAR8Q969N4 342 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 NECTIN4Q96NY8 510 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 FBRSQ9HAH7 460 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 OBP2BQ9NPH6 170 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 SULT1B1O43704 296 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 PRKD3O94806 890 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 SERPINA7P05543 415 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 TRIM46Q7Z4K8 759 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 ZNF681Q96N22 645 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 C7orf50Q9BRJ6 194 aaKnown RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.26□□□□□ -0.45
TCF4-248ENST00000616053 SCP2D1Q9UJQ7 156 aa12.26□□□□□ -0.45
TCF4-248ENST00000616053 SIGLEC16A6NMB1 481 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 A8MXE2 369 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 EDN1P05305 212 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 KCTD18Q6PI47 426 aaPredicted RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 PROKR1Q8TCW9 393 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 C2orf15Q8WU43 125 aaKnown RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 H1FXQ92522 213 aaKnown RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 HMCESQ96FZ2 354 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 RBM4BQ9BQ04 359 aaKnown RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 RBM4Q9BWF3 364 aaKnown RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 CNTN3Q9P232 1028 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 APOBEC3BQ9UH17 382 aaKnown RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 TRAF6Q9Y4K3 522 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 A0A1W2PRB8 838 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 EFCAB7A8K855 629 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 PCDH7O60245 1069 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 USP2O75604 605 aaPredicted RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 SLBPQ14493 270 aaKnown RBP eCLIP12.25□□□□□ -0.45
TCF4-248ENST00000616053 IFI44LQ53G44 452 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 ATG9BQ674R7 924 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 SLCO6A1Q86UG4 719 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 NSMAFQ92636 917 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 ZC3HAV1LQ96H79 300 aaKnown RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 AGPAT4Q9NRZ5 378 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 ANKRD30BLA7E2S9 258 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 GSK3AP49840 483 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 ID2Q02363 134 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 BBS12Q6ZW61 710 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 AHSA2Q719I0 299 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 KANSL1Q7Z3B3 1105 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 LACRTQ9GZZ8 138 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 COMMD3Q9UBI1 195 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 NAALAD2Q9Y3Q0 740 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 COMMD3-BMI1R4GMX3 469 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 MYH2Q9UKX2 1941 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 A0A0J9YYE9 177 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 SPATA31C2B4DYI2 1134 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 H0Y8G0 127 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 MAPK3P27361 379 aaPredicted RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 CSKP41240 450 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 DMTNQ08495 405 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 GANABQ14697 944 aaKnown RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 BTBD16Q32M84 506 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 DNAJB7Q7Z6W7 309 aaPredicted RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 DBF4BQ8NFT6 615 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 NLGN2Q8NFZ4 835 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 OR6N2Q8NGY6 317 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 SLC6A7Q99884 636 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 URM1Q9BTM9 101 aaKnown RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 NUDT9Q9BW91 350 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 TRIP11Q15643 1979 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 ATP7AQ04656 1500 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 PECAM1P16284 738 aaPredicted RBP12.25□□□□□ -0.45
TCF4-248ENST00000616053 FUT4P22083 530 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 PPA1Q15181 289 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 PHTF2Q8N3S3 785 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 STT3BQ8TCJ2 826 aa12.25□□□□□ -0.45
TCF4-248ENST00000616053 TMEM59Q9BXS4 323 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms