RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 A0A0G2JN53 185 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 C9JVG2 144 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 P2RX6O15547 441 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 ERI3O43414 337 aaKnown RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 HCRTR1O43613 425 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 LRP3O75074 770 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 SEMA3DO95025 777 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 CPNE6O95741 557 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 KLK1P06870 262 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 ANXA4P09525 319 aaPredicted RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 PRPS2P11908 318 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 SDC1P18827 310 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 TIA1P31483 386 aaKnown RBP eCLIP16.73■□□□□ 0.275e-9■■■■■ 28.9
SREK1-216ENST00000612404 STXBP1P61764 594 aaKnown RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 RAE1P78406 368 aaKnown RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 IRX1P78414 480 aaPredicted RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 HYAL2Q12891 473 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 PWP1Q13610 501 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 TMEM35AQ53FP2 167 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 TMEM71Q6P5X7 295 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 RIPOR1Q6ZS17 1223 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 NAXDQ8IW45 347 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 KCT2Q8NC54 265 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 CMTM5Q96DZ9 223 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 C11orf24Q96F05 449 aaPredicted RBP16.73■□□□□ 0.27
SREK1-216ENST00000612404 NSL1Q96IY1 281 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 FCRL1Q96LA6 429 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 AICDAQ9GZX7 198 aa16.73■□□□□ 0.27
SREK1-216ENST00000612404 C4orf47A7E2U8 309 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 SLC22A3O75751 556 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 ESRRAP11474 423 aaPredicted RBP16.72■□□□□ 0.27
SREK1-216ENST00000612404 TACR1P25103 407 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 HKDC1Q2TB90 917 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 GK5Q6ZS86 529 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 DGLUCYQ7Z3D6 616 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 TMPRSS9Q7Z410 1059 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 MCATQ8IVS2 390 aaKnown RBP16.72■□□□□ 0.27
SREK1-216ENST00000612404 CARFQ8N187 725 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 ZNF655Q8N720 491 aaPredicted RBP16.72■□□□□ 0.27
SREK1-216ENST00000612404 NT5CQ8TCD5 201 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
SREK1-216ENST00000612404 MS4A6EQ96DS6 147 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 TM4SF19Q96DZ7 209 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 TEX37Q96LM6 180 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 SLC6A16Q9GZN6 736 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 KCNH6Q9H252 994 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 STARD5Q9NSY2 213 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 TAGLN3Q9UI15 199 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 COX4I1P13073 169 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 ACPPP15309 386 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 RAB8AP61006 207 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 BNIP1Q12981 228 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 SQSTM1Q13501 440 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 KCNAB1Q14722 419 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 ADPRMQ3LIE5 342 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 GALNT18Q6P9A2 607 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 TRIM40Q6P9F5 258 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 PAGE2Q7Z2X7 111 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 UBE3DQ7Z6J8 389 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 SNX32Q86XE0 403 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 DNAJC22Q8N4W6 341 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 CSNK1A1LQ8N752 337 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 DPY30Q9C005 99 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 ZIM2Q9NZV7 527 aa16.72■□□□□ 0.27
SREK1-216ENST00000612404 ARHGAP10A1A4S6 786 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 NR5A2O00482 541 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 LRATO95237 230 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 T-ENOLP0DO92 83 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 BSGP35613 385 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 SSR2P43308 183 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 CPA2P48052 419 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 HSD11B2P80365 405 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 COL9A2Q14055 689 aaPredicted RBP16.71■□□□□ 0.27
SREK1-216ENST00000612404 CYLC2Q14093 348 aaPredicted RBP16.71■□□□□ 0.27
SREK1-216ENST00000612404 SPRED3Q2MJR0 410 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 CCNYL2Q5T2Q4 361 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 OR4C11Q6IEV9 310 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 ZNF574Q6ZN55 896 aaPredicted RBP16.71■□□□□ 0.27
SREK1-216ENST00000612404 PRSS42Q7Z5A4 293 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 KRTCAP2Q8N6L1 136 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 OR2L5Q8NG80 312 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 ZCCHC10Q8TBK6 192 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 PROKR1Q8TCW9 393 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 GFM2Q969S9 779 aaKnown RBP16.71■□□□□ 0.27
SREK1-216ENST00000612404 EGLN2Q96KS0 407 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 KCNC2Q96PR1 638 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 GFM1Q96RP9 751 aaKnown RBP16.71■□□□□ 0.27
SREK1-216ENST00000612404 TUBB6Q9BUF5 446 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 NLNQ9BYT8 704 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 ACTL8Q9H568 366 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 IRAK4Q9NWZ3 460 aa16.71■□□□□ 0.27
SREK1-216ENST00000612404 ZNF292O60281 2723 aa16.71■□□□□ 0.26
SREK1-216ENST00000612404 C4orf51C9J302 202 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 EEDO75530 441 aaKnown RBP16.7■□□□□ 0.26
SREK1-216ENST00000612404 THRAP10827 490 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 MRPL19P49406 292 aaKnown RBP16.7■□□□□ 0.26
SREK1-216ENST00000612404 ACADVLP49748 655 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 TGM3Q08188 693 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 WASHC2DQ5SRD0 308 aa16.7■□□□□ 0.26
SREK1-216ENST00000612404 ABHD17CQ6PCB6 329 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms