RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 PSMD12O00232 456 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 TAF4O00268 1085 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 CDC7O00311 574 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 AZIN1O14977 448 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 TLX3O43711 291 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 SUPT3HO75486 399 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 ANXA5P08758 320 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 GFAPP14136 432 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 PVRP15151 417 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 TSPAN8P19075 237 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 MAGP20916 626 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 EEF1DP29692 281 aaKnown RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 CMPK1P30085 196 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 CDH13P55290 713 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 IRX1P78414 480 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 ABATP80404 500 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 CLCQ05315 142 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 PRDX1Q06830 199 aaKnown RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 CDC16Q13042 620 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 STX5Q13190 355 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 TSTA3Q13630 321 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 KCNAB1Q14722 419 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 TSNQ15631 228 aaKnown RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 PPP1R3AQ16821 1122 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 FIGLAQ6QHK4 219 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 AGTRAPQ6RW13 159 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 SUSD1Q6UWL2 747 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 FRA10AC1Q70Z53 315 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 PPFIBP2Q8ND30 876 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 OR2L3Q8NG85 312 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 ZNF483Q8TF39 744 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 N4BP2L2Q92802 583 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 EXT2Q93063 718 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 FBXL8Q96CD0 374 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 C3orf30Q96M34 536 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 CDRT15Q96T59 188 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 CTRCQ99895 268 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 KLHL25Q9H0H3 589 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 WDR41Q9HAD4 459 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 CCDC177Q9NQR7 707 aaPredicted RBP8.45□□□□□ -1.06
SMAD4-217ENST00000611848 FOXJ2Q9P0K8 574 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 ANKMY1Q9P2S6 941 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 FIS1Q9Y3D6 152 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 KLK4Q9Y5K2 254 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 DNAJC15Q9Y5T4 150 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 PTPRQQ9UMZ3 2332 aa8.45□□□□□ -1.06
SMAD4-217ENST00000611848 NPEPPSL1A6NEC2 478 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 H3BNX3 289 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 STMND1H3BQB6 276 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 PPP6CO00743 305 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 RRP8O43159 456 aaKnown RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 GUCA1CO95843 209 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 SNRPB2P08579 225 aaKnown RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 LIPCP11150 499 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 GPX3P22352 226 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 HRH2P25021 359 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 PSMB5P28074 263 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 GRIA3P42263 894 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 HNMTP50135 292 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 ART3Q13508 389 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 NAE1Q13564 534 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 CEACAM7Q14002 265 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 TGFBIQ15582 683 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 GPR19Q15760 415 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 ZIC1Q15915 447 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 ZC3H12BQ5HYM0 836 aaKnown RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 CDKL4Q5MAI5 379 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 TCHHL1Q5QJ38 904 aaPredicted RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 THEMIS2Q5TEJ8 643 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 KIAA1614Q5VZ46 1190 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 CAPN13Q6MZZ7 669 aaPredicted RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 C8orf82Q6P1X6 216 aaPredicted RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 HACD2Q6Y1H2 254 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 MBOAT1Q6ZNC8 495 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 GK5Q6ZS86 529 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 DHDDSQ86SQ9 333 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 KBTBD2Q8IY47 623 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 TRPC4APQ8TEL6 797 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 TWIST2Q8WVJ9 160 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 KCNE4Q8WWG9 221 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 PYDC1Q8WXC3 89 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 PMEPA1Q969W9 287 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 CCDC124Q96CT7 223 aaKnown RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 ZNF501Q96CX3 271 aaPredicted RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 NSUN5Q96P11 429 aaKnown RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 ACAT2Q9BWD1 397 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 MRPL1Q9BYD6 325 aaKnown RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 DPH1Q9BZG8 443 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 ATG10Q9H0Y0 220 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 AKTIPQ9H8T0 292 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 FAM60AQ9NP50 221 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 MRPS30Q9NP92 439 aaKnown RBP8.44□□□□□ -1.06
SMAD4-217ENST00000611848 MID1IP1Q9NPA3 183 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 TAC3Q9UHF0 121 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 SERTAD3Q9UJW9 196 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 PCTPQ9UKL6 214 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 PLCL2Q9UPR0 1127 aa8.44□□□□□ -1.06
SMAD4-217ENST00000611848 LRCH1Q9Y2L9 728 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms