RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ANKRD12Q6UB98 2062 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 AGXTP21549 392 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 HTR1BP28222 390 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 IFNGR2P38484 337 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 OR1E2P47887 323 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 DGKEP52429 567 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 CRISP3P54108 245 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ZXDBP98169 803 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 Q6ZNB5 142 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 C16orf62Q7Z3J2 963 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 PAPD5Q8NDF8 572 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 WDR36Q8NI36 951 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 MTERF3Q96E29 417 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ALG14Q96F25 216 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 DCSTAMPQ9H295 470 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 C3orf14Q9HBI5 128 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 CAPN10Q9HC96 672 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 SLC25A37Q9NYZ2 338 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 DNMT3BQ9UBC3 853 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 HSPE1-MOB4S4R3N1 261 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 H0YIV9 168 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 PSMD11O00231 422 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ZNF10P21506 573 aaPredicted RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 TLX1P31314 330 aaPredicted RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 SLC6A12P48065 614 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 GABARAPL2P60520 117 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 PPP2R2BQ00005 443 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 TIAL1Q01085 375 aaKnown RBP eCLIP6.13□□□□□ -1.43
SNX13-213ENST00000611725 RGNQ15493 299 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 SF1Q15637 639 aaKnown RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 INAQ16352 499 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 LRIF1Q5T3J3 769 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 CEACAM20Q6UY09 585 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 LINC00299Q6ZSB3 139 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 DPPA4Q7L190 304 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 VRK3Q8IV63 474 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 SLC5A8Q8N695 610 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 MRPL43Q8N983 215 aaKnown RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 RASGEF1AQ8N9B8 481 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 FAM110BQ8TC76 370 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 MAL2Q969L2 176 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 NACC2Q96BF6 587 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 MAPKAP1Q9BPZ7 522 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 TRIM39Q9HCM9 518 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 CTPS2Q9NRF8 586 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 KCNK6Q9Y257 313 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 POFUT2Q9Y2G5 429 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 GPSM3Q9Y4H4 160 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ANKRD28O15084 1053 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 SLC31A1O15431 190 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ERI3O43414 337 aaKnown RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 C1SP09871 688 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 TIMP2P16035 220 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 PSMA1P25786 263 aaKnown RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 IMPA1P29218 277 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 SLC16A1P53985 500 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 UGT8Q16880 541 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 GET4Q7L5D6 327 aaPredicted RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 ZNF554Q86TJ5 538 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 NAGSQ8N159 534 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 LILRA3Q8N6C8 439 aaPredicted RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 ITPKCQ96DU7 683 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 FERD3LQ96RJ6 166 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ATP6V1HQ9UI12 483 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ITGB1BP2Q9UKP3 347 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 SCAMP2O15127 329 aaKnown RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 MPZL2O60487 215 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 DNTTP04053 509 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ETFAP13804 333 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 EPCAMP16422 314 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 CSNK2A2P19784 350 aaPredicted RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 IQCCQ4KMZ1 466 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 CATSPEREQ5SY80 951 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 IER5LQ5T953 404 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ZNF551Q7Z340 670 aaPredicted RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 RNF175Q8N4F7 328 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ABHD11Q8NFV4 315 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 OR13F1Q8NGS4 319 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 OR14C36Q8NHC7 312 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 NFKBIDQ8NI38 313 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 LCN9Q8WX39 176 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ECHDC3Q96DC8 303 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 BTNL2Q9UIR0 455 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 SLC27A6Q9Y2P4 619 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ASPDHA6ND91 283 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 PAK4O96013 591 aaPredicted RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 TSPAN19P0C672 248 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ITIH1P19827 911 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 PAICSP22234 425 aaKnown RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 RAB8AP61006 207 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 MRPS15P82914 257 aaKnown RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 GNA13Q14344 377 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ATAT1Q5SQI0 421 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 GRHL2Q6ISB3 625 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 SHQ1Q6PI26 577 aaKnown RBP6.13□□□□□ -1.43
SNX13-213ENST00000611725 TBPL2Q6SJ96 375 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 VITQ6UXI7 678 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 ZSWIM9Q86XI8 627 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 MSRB3Q8IXL7 192 aa6.13□□□□□ -1.43
SNX13-213ENST00000611725 CYP4Z2PQ8N1L4 340 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms