RNA–Protein interactions for RNA: ENST00000609038.1

AP000553.2-201, humanhuman

BASIC

Gene AP000553.2, Length 441 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.2-201ENST00000609038 C1orf109Q9NX04 203 aa12.79□□□□□ -0.36
AP000553.2-201ENST00000609038 KLHL3Q9UH77 587 aa12.79□□□□□ -0.36
AP000553.2-201ENST00000609038 CDV3Q9UKY7 258 aaKnown RBP12.79□□□□□ -0.36
AP000553.2-201ENST00000609038 KIF26BQ2KJY2 2108 aa12.79□□□□□ -0.36
AP000553.2-201ENST00000609038 A0A088AWK7 358 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 LOC105369274A0A096LPK9 316 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 LOC102723532A0A0G2JNH3 316 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 NDUFS4O43181 175 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 PRAMEF10O60809 474 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 KCNK5O95279 499 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ETHE1O95571 254 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 LINC00032P0C843 101 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 LBPP18428 481 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ZNF10P21506 573 aaPredicted RBP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 CSTF2P33240 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ARSFP54793 590 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ITGA1P56199 1179 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 TRA2BP62995 288 aaKnown RBP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ERVK-8P63133 956 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 SKP1P63208 163 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 CYP4F3Q08477 520 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 TUBB3Q13509 450 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 C16orf72Q14CZ0 275 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 HERC3Q15034 1050 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 NDUFA9Q16795 377 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 IMPG1Q17R60 797 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 FAM214AQ32MH5 1076 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 SLC9B1Q4ZJI4 515 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ATP6AP1LQ52LC2 224 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 C6orf136Q5SQH8 315 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 WASHC2DQ5SRD0 308 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 GKAP1Q5VSY0 366 aaPredicted RBP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ADNP2Q6IQ32 1131 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ABHD17CQ6PCB6 329 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ABHD13Q7L211 337 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 B3GNT8Q7Z7M8 397 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 FAM9CQ8IZT9 166 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ZCCHC7Q8N3Z6 543 aaKnown RBP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 RFWD2Q8NHY2 731 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 RGMAQ96B86 450 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 QRFPRQ96P65 431 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 KCNC2Q96PR1 638 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ZPBPQ9BS86 351 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 TMEM120AQ9BXJ8 343 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 ZNF717Q9BY31 904 aaPredicted RBP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 AICDAQ9GZX7 198 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 KLHL25Q9H0H3 589 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 DDX31Q9H8H2 851 aaKnown RBP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 AKTIPQ9H8T0 292 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 LRTM1Q9HBL6 345 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 FGF21Q9NSA1 209 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 RAPGEFL1Q9UHV5 662 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 SERTAD3Q9UJW9 196 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 CLCA2Q9UQC9 943 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 RUVBL1Q9Y265 456 aaKnown RBP12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 FIS1Q9Y3D6 152 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 PCDHB3Q9Y5E6 796 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 SEC16AO15027 2179 aa12.78□□□□□ -0.36
AP000553.2-201ENST00000609038 CCDC187A0A096LP49 1063 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 A8MU76 341 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 P2RX6O15547 441 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 HCRTR1O43613 425 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 ONECUT2O95948 504 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 TGFB1P01137 390 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 HBQ1P09105 142 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 PRPS2P11908 318 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 FOLR1P15328 257 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 MAPK1P28482 360 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 ADSLP30566 484 aaPredicted RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 HNRNPH1P31943 449 aaKnown RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 BSGP35613 385 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 SEPHS1P49903 392 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 ATP4BP51164 291 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 NOVA1P51513 510 aaKnown RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 RAB15P59190 212 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 HMGCS1Q01581 520 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 DDX39BQ13838 428 aaKnown RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 NR6A1Q15406 480 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 AP5B1Q2VPB7 878 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 SNAP47Q5SQN1 464 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 PHF19Q5T6S3 580 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 HES3Q5TGS1 186 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 IGF2-ASQ6U949 168 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 MED25Q71SY5 747 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 PAGE2Q7Z2X7 111 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 GALNT15Q8N3T1 639 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 TTC29Q8NA56 475 aaPredicted RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 UTP15Q8TED0 518 aaKnown RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 TUBGCP3Q96CW5 907 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 LRFN5Q96NI6 719 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 ELAC2Q9BQ52 826 aaKnown RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 NPLQ9BXD5 320 aaPredicted RBP12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.37
AP000553.2-201ENST00000609038 PRDM7Q9NQW5 492 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms