RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 STX7O15400 261 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 LYPLA1O75608 230 aaPredicted RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 CCNB2O95067 398 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 DEXIO95424 95 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 OPN1LWP04000 364 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 JUNP05412 331 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 GSTP1P09211 210 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF735P0CB33 412 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ADORA3P0DMS8 318 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 NR2F1P10589 423 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 FCER1AP12319 257 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 OGNP20774 298 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ZP3P21754 424 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 S100PP25815 95 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ADORA1P30542 326 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 MARCKSL1P49006 195 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 GZMKP49863 264 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 NUDT2P50583 147 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 SMSP52788 366 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 PSMD4P55036 377 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 FCGRTP55899 365 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 HERVK_113P63132 956 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 MERTKQ12866 999 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 DRAP1Q14919 205 aaPredicted RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 SLC5A12Q1EHB4 618 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 CLEC16AQ2KHT3 1053 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 GAB4Q2WGN9 574 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 PAN3Q58A45 887 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 BHLHB9Q6PI77 547 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 MAMDC4Q6UXC1 1216 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 TIPARPQ7Z3E1 657 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 IRF2BP2Q7Z5L9 587 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 POLNQ7Z5Q5 900 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 SLITRK4Q8IW52 837 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 FAM217AQ8IXS0 508 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF461Q8TAF7 563 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 NDNFQ8TB73 568 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 LKAAEAR1Q8TD35 194 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 C1orf54Q8WWF1 131 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 RBPMSQ93062 196 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 FUBP1Q96AE4 644 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 EXOSC8Q96B26 276 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 MBOAT7Q96N66 472 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 TRNT1Q96Q11 434 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 BBS4Q96RK4 519 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ZSWIM1Q9BR11 485 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 FAM213AQ9BRX8 229 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 SPNS1Q9H2V7 528 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ADAMTS10Q9H324 1103 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 POFUT1Q9H488 388 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 LDAHQ9H6V9 325 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 NIPAL2Q9H841 368 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ENTPD7Q9NQZ7 604 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 CATSPERZQ9NTU4 200 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 CCM2LQ9NUG4 571 aaPredicted RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 CTSFQ9UBX1 484 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 NUFIP1Q9UHK0 495 aaKnown RBP4.57□□□□□ -1.68
LINC01109-201ENST00000603837 ASB4Q9Y574 426 aa4.57□□□□□ -1.68
LINC01109-201ENST00000603837 LAMB1P07942 1786 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ARFGEF1Q9Y6D6 1849 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 WDR64B1ANS9 1081 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 NPIPA7E9PJI5 369 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 WWP2O00308 870 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SOCS2O14508 198 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SLC30A4O14863 429 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 HCRTR2O43614 444 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SSX4O60224 188 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 KLKB1P03952 638 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TMEM253P0C7T8 217 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SPATA31C1P0DKV0 1188 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 NPIPA8P0DM63 369 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 HNF1AP20823 631 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PCMT1P22061 227 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ME2P23368 584 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ADSSP30520 456 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MC5RP33032 325 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CD79BP40259 229 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ETV4P43268 484 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PREPP48147 710 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PKNOX1P55347 436 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TFAMQ00059 246 aaKnown RBP4.56□□□□□ -1.68
LINC01109-201ENST00000603837 MS4A2Q01362 244 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 SEMA3BQ13214 749 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 GPR50Q13585 617 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 NFIXQ14938 502 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TAB1Q15750 504 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CTF1Q16619 201 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 HSDL1Q3SXM5 330 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 DUSP28Q4G0W2 176 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 PRAMEF19Q5SWL8 479 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 KRT39Q6A163 491 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 OR6B2Q6IFH4 312 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 C11orf63Q6NUN7 778 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 CDPF1Q6NVV7 123 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 C3orf33Q6P1S2 294 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 KCTD9Q7L273 389 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 ERASQ7Z444 233 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 NLGN4XQ8N0W4 816 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 BHLHE23Q8NDY6 225 aa4.56□□□□□ -1.68
LINC01109-201ENST00000603837 TRPV1Q8NER1 839 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms