RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 M1APQ8TC57 530 aa19.96■□□□□ 0.79
PPFIA3-209ENST00000602783 SLC5A11Q8WWX8 675 aa19.96■□□□□ 0.79
PPFIA3-209ENST00000602783 VPS39Q96JC1 886 aa19.96■□□□□ 0.79
PPFIA3-209ENST00000602783 TSNARE1Q96NA8 513 aa19.96■□□□□ 0.79
PPFIA3-209ENST00000602783 RBCK1Q9BYM8 510 aa19.96■□□□□ 0.79
PPFIA3-209ENST00000602783 RHOJQ9H4E5 214 aa19.96■□□□□ 0.79
PPFIA3-209ENST00000602783 SAYSD1Q9NPB0 183 aa19.96■□□□□ 0.79
PPFIA3-209ENST00000602783 ENTPD4Q9Y227 616 aa19.96■□□□□ 0.79
PPFIA3-209ENST00000602783 PRSS44E7EML9 344 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 NDUFS4O43181 175 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 HNRNPRO43390 633 aaKnown RBP19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 SERPIND1P05546 499 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 RHAGQ02094 409 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 ABRAXAS2Q15018 415 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 HERC3Q15034 1050 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 EXT1Q16394 746 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 MEP1AQ16819 746 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 CATSPEREQ5SY80 951 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 PAPD4Q6PIY7 484 aaKnown RBP19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 MAATS1Q7Z4T9 603 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 CRLF3Q8IUI8 442 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 CEP97Q8IW35 865 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 OR4K1Q8NGD4 311 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 OR5T3Q8NGG3 340 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 PYROXD1Q8WU10 500 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 NEIL2Q969S2 332 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 MARVELD3Q96A59 401 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 MOCOSQ96EN8 888 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 MCMBPQ9BTE3 642 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 SARGQ9BW04 601 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 SPNS1Q9H2V7 528 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 LANCL2Q9NS86 450 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 GRHL1Q9NZI5 618 aa19.95■□□□□ 0.78
PPFIA3-209ENST00000602783 TRBC2A0A5B9 178 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 ENO4A6NNW6 628 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 CCL21O00585 134 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 WISP2O76076 250 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 IL10P22301 178 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 SSTR1P30872 391 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 CASQ1P31415 396 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 TUBA3CQ13748 450 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 CSHL1Q14406 222 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 TUBA3EQ6PEY2 450 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 SRRM1Q8IYB3 904 aaKnown RBP19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 ZNF740Q8NDX6 193 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 ANKRD49Q8WVL7 239 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 ANKRD7Q92527 254 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 TSLPQ969D9 159 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 SIGLEC12Q96PQ1 595 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 OR1F2PQ96R84 312 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 LPAR4Q99677 370 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 EGFL8Q99944 293 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 GPAMQ9HCL2 828 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 MMP25Q9NPA2 562 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 ANKRD10Q9NXR5 420 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 SUCOQ9UBS9 1254 aaKnown RBP19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 DYRK1BQ9Y463 629 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 OARD1Q9Y530 152 aa19.94■□□□□ 0.78
PPFIA3-209ENST00000602783 MAGEB17A8MXT2 336 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 EIF3HO15372 352 aaKnown RBP eCLIP19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 GALR3O60755 368 aaPredicted RBP19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 DNAJB6O75190 326 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 B3GALT4O96024 378 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 CD96P40200 585 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 OR4D2P58180 307 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 REEP5Q00765 189 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 RBPJQ06330 500 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 PWP1Q13610 501 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 TSNQ15631 228 aaKnown RBP19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 DEFB134Q4QY38 66 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 FRA10AC1Q70Z53 315 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 TMPRSS11BQ86T26 416 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 ADAMTSL2Q86TH1 951 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 THOC6Q86W42 341 aaKnown RBP19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 AFAP1L2Q8N4X5 818 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 TBC1D19Q8N5T2 526 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 NPAS2Q99743 824 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 UTP23Q9BRU9 249 aaKnown RBP19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 POPDC3Q9HBV1 291 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 KLHL1Q9NR64 748 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 CTNNAL1Q9UBT7 734 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 SH3BGRL2Q9UJC5 107 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 PCDHGB6Q9Y5F9 930 aa19.93■□□□□ 0.78
PPFIA3-209ENST00000602783 LRBAP50851 2863 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 CXorf49A8MYA2 514 aaPredicted RBP19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 CHST10O43529 356 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 MAN1A2O60476 641 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 FHP07954 510 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 ALOX12P18054 663 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 CA7P43166 264 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 SLC12A2P55011 1212 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 ETF1P62495 437 aaKnown RBP19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 OLR1P78380 273 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 CDKL1Q00532 357 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 USP10Q14694 798 aaKnown RBP19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 OR1C1Q15619 314 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 SPINK14Q6IE38 97 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 SYT10Q6XYQ8 523 aa19.92■□□□□ 0.78
PPFIA3-209ENST00000602783 MDS2Q8NDY4 140 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms