RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 UTP4Q969X6 686 aaKnown RBP17.17■□□□□ 0.34
VRK3-225ENST00000601912 ZDHHC12Q96GR4 267 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 OR2A5Q96R48 311 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 RAB33BQ9H082 229 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 MAP10Q9P2G4 905 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 GMEB2Q9UKD1 530 aa17.17■□□□□ 0.34
VRK3-225ENST00000601912 WBP11Q9Y2W2 641 aaKnown RBP17.17■□□□□ 0.34
VRK3-225ENST00000601912 NPPAP01160 153 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 GBAP04062 536 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 COX7A2P14406 83 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 BSGP35613 385 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 RPL3P39023 403 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 PLA2G16P53816 162 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 NFYCQ13952 458 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 NR0B2Q15466 257 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 MAPKAPK3Q16644 382 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 PGS1Q32NB8 556 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 TOR1AIP1Q5JTV8 583 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 OR4C11Q6IEV9 310 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 TRIM40Q6P9F5 258 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 BNC2Q6ZN30 1099 aaPredicted RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 SCUBE1Q8IWY4 988 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 ZNF655Q8N720 491 aaPredicted RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 CAMKVQ8NCB2 501 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 OR2L5Q8NG80 312 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 NT5CQ8TCD5 201 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 C16orf78Q8WTQ4 265 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 NCSTNQ92542 709 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 MS4A6EQ96DS6 147 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 FCRL4Q96PJ5 515 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 KCNC2Q96PR1 638 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 TRAPPC9Q96Q05 1148 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 OR52E6Q96RD3 313 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 HOPXQ9BPY8 73 aaPredicted RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 RMND5AQ9H871 391 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 MYNNQ9NPC7 610 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 EPHA6Q9UF33 1036 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 PCDHGA5Q9Y5G8 931 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 URADA6NGE7 173 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 RTCAO00442 366 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 ERI3O43414 337 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 DUX1O43812 170 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 EPN2O95208 641 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 STATHP02808 62 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 TPP2P29144 1249 aaPredicted RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 MPLP40238 635 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 SSR2P43308 183 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 KIR3DL1P43629 444 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 GSTM5P46439 218 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 MAPK12P53778 367 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 OR1D5P58170 312 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 PSME3P61289 254 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 GPLD1P80108 840 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 HYAL2Q12891 473 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 NR1D2Q14995 579 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 PRMT9Q6P2P2 845 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 ZC3H14Q6PJT7 736 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 RIPOR1Q6ZS17 1223 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 IKBIPQ70UQ0 350 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 RNF44Q7L0R7 432 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 VN1R4Q7Z5H5 301 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 R3HCC1LQ7Z5L2 792 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 GPR180Q86V85 440 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 DPP10Q8N608 796 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 C19orf47Q8N9M1 422 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 NUDT8Q8WV74 236 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 TM4SF19Q96DZ7 209 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 CD180Q99467 661 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 MACROD1Q9BQ69 325 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 C17orf62Q9BQA9 187 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 SORBS1Q9BX66 1292 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 ZNF717Q9BY31 904 aaPredicted RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 SLC6A16Q9GZN6 736 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 ZMYND15Q9H091 742 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 KLHL31Q9H511 634 aa17.16■□□□□ 0.34
VRK3-225ENST00000601912 DDX31Q9H8H2 851 aaKnown RBP17.16■□□□□ 0.34
VRK3-225ENST00000601912 MDC1Q14676 2089 aaKnown RBP17.15■□□□□ 0.34
VRK3-225ENST00000601912 DNAH14Q0VDD8 3507 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 IGHV1OR21-1A0A087WYE8 117 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 ASPDHA6ND91 283 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 SLC9B1P1A6NJY1 282 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 TRIM38O00635 465 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 SCAMP2O15127 329 aaKnown RBP17.15■□□□□ 0.34
VRK3-225ENST00000601912 MAP3K7O43318 606 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 ST6GAL1P15907 406 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 TSFMP43897 325 aaKnown RBP17.15■□□□□ 0.34
VRK3-225ENST00000601912 TAS2R50P59544 299 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 FOXM1Q08050 763 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 TRMT5Q32P41 509 aaKnown RBP17.15■□□□□ 0.34
VRK3-225ENST00000601912 ZC3H12BQ5HYM0 836 aaKnown RBP17.15■□□□□ 0.34
VRK3-225ENST00000601912 PAGE3Q5JUK9 113 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 SLC2A7Q6PXP3 512 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 FAM92BQ6ZTR7 304 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 MSANTD1Q6ZTZ1 278 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 UBE3DQ7Z6J8 389 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 ULK2Q8IYT8 1036 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 FAM181AQ8N9Y4 354 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.15■□□□□ 0.34
VRK3-225ENST00000601912 LRRC58Q96CX6 371 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms