RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 FAM53BQ14153 422 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 FAM214AQ32MH5 1076 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 XKR7Q5GH72 579 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 TOR1AIP1Q5JTV8 583 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 RHBDD2Q6NTF9 364 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 ABHD17CQ6PCB6 329 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 FOXR1Q6PIV2 292 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SCIMPQ6UWF3 145 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 Q6ZSR9 355 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 UBE3DQ7Z6J8 389 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 CRLF3Q8IUI8 442 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 TMEM126BQ8IUX1 230 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 TTC29Q8NA56 475 aaPredicted RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SLC38A9Q8NBW4 561 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 OR2L5Q8NG80 312 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 PIWIL2Q8TC59 973 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 UTP15Q8TED0 518 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 CCT6BQ92526 530 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 GAL3ST3Q96A11 431 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SLC46A1Q96NT5 459 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 F2RL3Q96RI0 385 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SERPINI1Q99574 410 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 CCT7Q99832 543 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SCNM1Q9BWG6 230 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 REXO4Q9GZR2 422 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 OR51B5Q9H339 312 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 ASCL3Q9NQ33 180 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 CUTCQ9NTM9 273 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 IRAK4Q9NWZ3 460 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 SRPK3Q9UPE1 567 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 FIS1Q9Y3D6 152 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 NEUROG3Q9Y4Z2 214 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 PCDHGA7Q9Y5G6 932 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 PTGDR2Q9Y5Y4 395 aa12.03□□□□□ -0.48
CHMP2A-206ENST00000600118 PTPRBP23467 1997 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 CDRT15L2A8MXV6 281 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 PIP5K1BO14986 540 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 HDAC3O15379 428 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 NVLO15381 856 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 DLGAP3O95886 979 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 ONECUT2O95948 504 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 ADRB1P08588 477 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 HBQ1P09105 142 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 ALOX12P18054 663 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 PRPH2P23942 346 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 RORAP35398 523 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 HK2P52789 917 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 ARSFP54793 590 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 BTKQ06187 659 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 TBL3Q12788 808 aaKnown RBP12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 NDUFA9Q16795 377 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 MUM1Q2TAK8 710 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF385CQ66K41 422 aaPredicted RBP12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 FAM47EQ6ZV65 393 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 CHSY3Q70JA7 882 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 MAVSQ7Z434 540 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 MVB12AQ96EY5 273 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 LRFN5Q96NI6 719 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 QRFPRQ96P65 431 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 GBP5Q96PP8 586 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF317Q96PQ6 595 aaPredicted RBP12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 NDC1Q9BTX1 674 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF717Q9BY31 904 aaPredicted RBP12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 ACTR5Q9H9F9 607 aaPredicted RBP12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 LHX9Q9NQ69 397 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 FOXJ2Q9P0K8 574 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 VPS29Q9UBQ0 182 aa12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 MARCOQ9UEW3 520 aaPredicted RBP12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 TMEM184BQ9Y519 407 aaPredicted RBP12.02□□□□□ -0.49
CHMP2A-206ENST00000600118 SPTBN2O15020 2390 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 TRABD2BA6NFA1 517 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 URADA6NGE7 173 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 SLCO1B7G3V0H7 640 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 SLC28A1O00337 649 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 PLPP1O14494 284 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 DSCR3O14972 297 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 POLR3GO15318 223 aaPredicted RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 ERI3O43414 337 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 GALR3O60755 368 aaPredicted RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 CPNE3O75131 537 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 SH3BGRLO75368 114 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 RSL1D1O76021 490 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 SCELO95171 688 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 NSA2O95478 260 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 NTRK1P04629 796 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 LINC00032P0C843 101 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 ZNF888P0CJ79 500 aaPredicted RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 ALOX15P16050 662 aaPredicted RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 SPINK2P20155 84 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 ITGAXP20702 1163 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 RAB8AP61006 207 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 HMGCS1Q01581 520 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 HERC3Q15034 1050 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 ABHD13Q7L211 337 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 PRSS41Q7RTY9 318 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 PDSS2Q86YH6 399 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 WDR75Q8IWA0 830 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 METTL4Q8N3J2 472 aa12.01□□□□□ -0.49
CHMP2A-206ENST00000600118 DTWD1Q8N5C7 304 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms