RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 SEC16BQ96JE7 1060 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 VPS50Q96JG6 964 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 CCDC77Q9BR77 488 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 MESP1Q9BRJ9 268 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 AICDAQ9GZX7 198 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 ATP13A2Q9NQ11 1180 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 HCN3Q9P1Z3 774 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 FBXL4Q9UKA2 621 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 BSNQ9UPA5 3926 aa15.83■□□□□ 0.12
SSBP4-204ENST00000597724 ZNF860A6NHJ4 632 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 ANKDD1BA6NHY2 528 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 A6NL46 340 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 JRKO75564 520 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 CLEC3AO75596 197 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 B3GALT4O96024 378 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 PDGFAP04085 211 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 HEXBP07686 556 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 EPB42P16452 691 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 HNF4AP41235 474 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 XCR1P46094 333 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 EFNA3P52797 238 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 LAPTM5Q13571 262 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 NAA30Q147X3 362 aaPredicted RBP15.82■□□□□ 0.12
SSBP4-204ENST00000597724 PCBP2Q15366 365 aaKnown RBP eCLIP15.82■□□□□ 0.128e-8■■■■■ 32.6
SSBP4-204ENST00000597724 TUBB8Q3ZCM7 444 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 PAGE2BQ5JRK9 111 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 ASB18Q6ZVZ8 466 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 ZNF605Q86T29 641 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 PTRH1Q86Y79 214 aaKnown RBP15.82■□□□□ 0.12
SSBP4-204ENST00000597724 GALNT16Q8N428 558 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 TEX9Q8N6V9 391 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 UBLCP1Q8WVY7 318 aaPredicted RBP15.82■□□□□ 0.12
SSBP4-204ENST00000597724 KLHL31Q9H511 634 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 CPSF2Q9P2I0 782 aaKnown RBP15.82■□□□□ 0.12
SSBP4-204ENST00000597724 PSMC3IPQ9P2W1 217 aaPredicted RBP15.82■□□□□ 0.12
SSBP4-204ENST00000597724 MKL2Q9ULH7 1088 aa15.82■□□□□ 0.12
SSBP4-204ENST00000597724 GCN1Q92616 2671 aaKnown RBP15.82■□□□□ 0.12
SSBP4-204ENST00000597724 IQANK1A0A1B0GTG1 560 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 A0A1W2PQ72 361 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 LRIT2A6NDA9 550 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 LRRC14BA6NHZ5 514 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 PCDH17O14917 1159 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 DNAJB6O75190 326 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 SLU7O95391 586 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 TBX6O95947 436 aaPredicted RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 ACPPP15309 386 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 RAB8AP61006 207 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 STXBP1P61764 594 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 SKP1P63208 163 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 AIMP2Q13155 320 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 HIST2H2ACQ16777 129 aaPredicted RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 TOR1AIP1Q5JTV8 583 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 HIST2H2AA3Q6FI13 130 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 METTL2BQ6P1Q9 378 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 VN1R5Q7Z5H4 357 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 CNPY4Q8N129 248 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 OR5T3Q8NGG3 340 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 C8orf44Q96CB5 159 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 SCYL1Q96KG9 808 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 NUDT9Q9BW91 350 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 RHBGQ9H310 441 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 CLK4Q9HAZ1 481 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 GPR83Q9NYM4 423 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 XPR1Q9UBH6 696 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 TMCO1Q9UM00 188 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 G3BP2Q9UN86 482 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 ANGPTL3Q9Y5C1 460 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 PCDHGB7Q9Y5F8 929 aa15.81■□□□□ 0.12
SSBP4-204ENST00000597724 TNPO3Q9Y5L0 923 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 PRRC2CQ9Y520 2896 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 HELZ2Q9BYK8 2649 aaKnown RBP15.81■□□□□ 0.12
SSBP4-204ENST00000597724 TNRC6AQ8NDV7 1962 aaKnown RBP15.8■□□□□ 0.12
SSBP4-204ENST00000597724 C4orf51C9J302 202 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 SUV39H1O43463 412 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 CHST10O43529 356 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 SIX3O95343 332 aaPredicted RBP15.8■□□□□ 0.12
SSBP4-204ENST00000597724 SHBGP04278 402 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 CYC1P08574 325 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 IL10P22301 178 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 HNRNPH1P31943 449 aaKnown RBP15.8■□□□□ 0.12
SSBP4-204ENST00000597724 PGDP52209 483 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 VSNL1P62760 191 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 MYBPC3Q14896 1274 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 ADPRMQ3LIE5 342 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 ADNP2Q6IQ32 1131 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 TMEM205Q6UW68 189 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 LAS2Q8IYD9 372 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 TMEM151AQ8N4L1 468 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 CCT6BQ92526 530 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 GAL3ST3Q96A11 431 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 MS4A6EQ96DS6 147 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 PEX11GQ96HA9 241 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 OR1F2PQ96R84 312 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 MRPL57Q9BQC6 102 aaKnown RBP15.8■□□□□ 0.12
SSBP4-204ENST00000597724 VN1R1Q9GZP7 353 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 MRPL46Q9H2W6 279 aaKnown RBP15.8■□□□□ 0.12
SSBP4-204ENST00000597724 LANCL2Q9NS86 450 aa15.8■□□□□ 0.12
SSBP4-204ENST00000597724 HEMK1Q9Y5R4 338 aaPredicted RBP15.8■□□□□ 0.12
SSBP4-204ENST00000597724 LOC102723996A0A087X1L8 192 aa15.79■□□□□ 0.12
SSBP4-204ENST00000597724 SMIM24O75264 130 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms