RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 SCN3AQ9NY46 2000 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 OR7A17O14581 309 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 DLX3O60479 287 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 SMIM10L1P0DMW3 83 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 ALOX12P18054 663 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 CASP2P42575 452 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 CCR10P46092 362 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 AVPR1BP47901 424 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 OCA2Q04671 838 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 RGS1Q08116 209 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 TOR1AIP1Q5JTV8 583 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 FAAH2Q6GMR7 532 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 MYLK4Q86YV6 388 aaPredicted RBP14.55□□□□□ -0.08
USE1-206ENST00000595101 ZC3H7AQ8IWR0 971 aaKnown RBP14.55□□□□□ -0.08
USE1-206ENST00000595101 C4orf33Q8N1A6 199 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 KRT78Q8N1N4 520 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 TBC1D19Q8N5T2 526 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 TRPV3Q8NET8 790 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 OR51Q1Q8NH59 317 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 C8orf44Q96CB5 159 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 SMIM10Q96HG1 83 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 FAM117AQ9C073 453 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 ING2Q9H160 280 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 NOL11Q9H8H0 719 aaKnown RBP14.55□□□□□ -0.08
USE1-206ENST00000595101 IPPKQ9H8X2 491 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 ANKHQ9HCJ1 492 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 PCTPQ9UKL6 214 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 RNF11Q9Y3C5 154 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 ANGPTL3Q9Y5C1 460 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 HS3ST3B1Q9Y662 390 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 LRIT2A6NDA9 550 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 H0YIG0 161 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 SOCS6O14544 535 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 GALR3O60755 368 aaPredicted RBP14.55□□□□□ -0.08
USE1-206ENST00000595101 SMIM24O75264 130 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 CDH16O75309 829 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 BMP10O95393 424 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 SERPINA6P08185 405 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 NR1D1P20393 614 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 CXCR2P25025 360 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 PIK3CGP48736 1102 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 CDH13P55290 713 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 TBCCQ15814 346 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 KIRREL2Q6UWL6 708 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 ACMSDQ8TDX5 336 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 THAP4Q8WY91 577 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 ABHD17AQ96GS6 310 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 CRB3Q9BUF7 120 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 EFCAB11Q9BUY7 163 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 NT5DC2Q9H857 520 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 SEMA4BQ9NPR2 832 aaPredicted RBP14.55□□□□□ -0.08
USE1-206ENST00000595101 P4HTMQ9NXG6 502 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 C3orf18Q9UK00 162 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 PLAAQ9Y263 795 aa14.55□□□□□ -0.08
USE1-206ENST00000595101 ANKDD1BA6NHY2 528 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 IDSB3KWA1 339 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 STX16-NPEPL1H3BU86 382 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 STX16O14662 325 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 CDC123O75794 336 aaPredicted RBP14.54□□□□□ -0.08
USE1-206ENST00000595101 C1QL1O75973 258 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 PCNAP12004 261 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 KRT4P19013 534 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 MMP11P24347 488 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 XCR1P46094 333 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 CCL11P51671 97 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 PLA2G16P53816 162 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 PCDH1Q08174 1060 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 HERC3Q15034 1050 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 RASA2Q15283 850 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 OR7G3Q8NG95 312 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 MS4A6EQ96DS6 147 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 PEX11GQ96HA9 241 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 F2RL3Q96RI0 385 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 ACTR8Q9H981 624 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 PRDM4Q9UKN5 801 aa14.54□□□□□ -0.08
USE1-206ENST00000595101 TNPO3Q9Y5L0 923 aaKnown RBP14.54□□□□□ -0.08
USE1-206ENST00000595101 CFAP46Q8IYW2 2715 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 A6NL46 340 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 SAP18O00422 153 aaKnown RBP14.53□□□□□ -0.08
USE1-206ENST00000595101 TGFB1P01137 390 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 NEK2P51955 445 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 BTN3A2P78410 334 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 IFFO1Q0D2I5 559 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 RAPSNQ13702 412 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 CPSF6Q16630 551 aaKnown RBP eCLIP14.53□□□□□ -0.08
USE1-206ENST00000595101 GRHL2Q6ISB3 625 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 UBE3DQ7Z6J8 389 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 LAS2Q8IYD9 372 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 MREGQ8N565 214 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 ZNF473Q8WTR7 871 aaKnown RBP14.53□□□□□ -0.08
USE1-206ENST00000595101 TMEM237Q96Q45 408 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 MTERF1Q99551 399 aaKnown RBP14.53□□□□□ -0.08
USE1-206ENST00000595101 TGIF2Q9GZN2 237 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 RHBGQ9H310 441 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 MKKSQ9NPJ1 570 aaPredicted RBP14.53□□□□□ -0.08
USE1-206ENST00000595101 RRAGDQ9NQL2 400 aaPredicted RBP14.53□□□□□ -0.08
USE1-206ENST00000595101 ZNF71Q9NQZ8 489 aaPredicted RBP14.53□□□□□ -0.08
USE1-206ENST00000595101 MED13Q9UHV7 2174 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 ZNF225Q9UK10 706 aa14.53□□□□□ -0.08
USE1-206ENST00000595101 MKL2Q9ULH7 1088 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms