RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 COPS3Q9UNS2 423 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 PCDHA10Q9Y5I2 948 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 TRPV2Q9Y5S1 764 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 TRAPPC13A5PLN9 417 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 PPEF2O14830 753 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 RGS5O15539 181 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 ACSL4O60488 711 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 IPO13O94829 963 aaKnown RBP4.23□□□□□ -1.73
LRIT3-202ENST00000594814 HMGCRP04035 888 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SLC2A1P11166 492 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 ETS1P14921 441 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SPNP16150 400 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 LAG3P18627 525 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 GPX3P22352 226 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 GALP22466 123 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 ITGB7P26010 798 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SHMT2P34897 504 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 RFX2P48378 723 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 PRMT2P55345 433 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 PLIN5Q00G26 463 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 CYP24A1Q07973 514 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 CLN3Q13286 438 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 MAPK11Q15759 364 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 EIF2S3LQ2VIR3 472 aaKnown RBP4.23□□□□□ -1.73
LRIT3-202ENST00000594814 MINDY4Q4G0A6 757 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 IGSF11Q5DX21 431 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 VARS2Q5ST30 1063 aaKnown RBP4.23□□□□□ -1.73
LRIT3-202ENST00000594814 CATSPEREQ5SY80 951 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SLFN12LQ6IEE8 588 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 C11orf88Q6PI97 169 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 TMEM107Q6UX40 140 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 TMPRSS11AQ6ZMR5 421 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 PDZD4Q76G19 769 aaPredicted RBP4.23□□□□□ -1.73
LRIT3-202ENST00000594814 C16orf62Q7Z3J2 963 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 PIWIL3Q7Z3Z3 882 aaKnown RBP4.23□□□□□ -1.73
LRIT3-202ENST00000594814 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.23□□□□□ -1.73
LRIT3-202ENST00000594814 RFX6Q8HWS3 928 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 DENND6AQ8IWF6 608 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 OR2C3Q8N628 320 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 YIPF7Q8N8F6 280 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 DMBX1Q8NFW5 382 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 OR4M2Q8NGB6 313 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 OR2T11Q8NH01 316 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 OR52N1Q8NH53 320 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 MOSPD2Q8NHP6 518 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SHKBP1Q8TBC3 707 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 ZNF296Q8WUU4 475 aaPredicted RBP4.23□□□□□ -1.73
LRIT3-202ENST00000594814 ATOH1Q92858 354 aaPredicted RBP4.23□□□□□ -1.73
LRIT3-202ENST00000594814 MARC2Q969Z3 335 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 TMEM125Q96AQ2 219 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 PTERQ96BW5 349 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 LRRC58Q96CX6 371 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 CERS2Q96G23 380 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 TMEM41AQ96HV5 264 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 TMEM68Q96MH6 324 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 C12orf57Q99622 126 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SLC30A3Q99726 388 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SEC22CQ9BRL7 303 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 CDCA4Q9BXL8 241 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 ZDHHC5Q9C0B5 715 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 RHOJQ9H4E5 214 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 C11orf49Q9H6J7 331 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 OPA3Q9H6K4 179 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 CYP3A43Q9HB55 503 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 RAB6BQ9NRW1 208 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SLCO3A1Q9UIG8 710 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 AURKCQ9UQB9 309 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 WDR87Q6ZQQ6 2873 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 SIP14410 1827 aa4.23□□□□□ -1.73
LRIT3-202ENST00000594814 GLYATL1P3A0A0U1RQE8 302 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 IRGMA1A4Y4 181 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 MEX3AA1L020 520 aaKnown RBP4.22□□□□□ -1.73
LRIT3-202ENST00000594814 ANKRD61A6NGH8 418 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 ANKDD1BA6NHY2 528 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 CXorf49A8MYA2 514 aaPredicted RBP4.22□□□□□ -1.73
LRIT3-202ENST00000594814 KCNU1A8MYU2 1149 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 TMX2-CTNND1H3BSU7 103 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 UPK1AO00322 258 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 NME4O00746 187 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 PHYHO14832 338 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 HUS1O60921 280 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 GPX5O75715 221 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 SLC25A27O95847 323 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 IFNGP01579 166 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 PIGRP01833 764 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 C9P02748 559 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 HEXAP06865 529 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 CRYGCP07315 174 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 PRR35P0CG20 571 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 ANXA3P12429 323 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 DARSP14868 501 aaKnown RBP4.22□□□□□ -1.73
LRIT3-202ENST00000594814 DDCP20711 480 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 PSEN2P49810 448 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 AFF1P51825 1210 aaKnown RBP4.22□□□□□ -1.73
LRIT3-202ENST00000594814 PPP3R1P63098 170 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 CSTF3Q12996 717 aaKnown RBP4.22□□□□□ -1.73
LRIT3-202ENST00000594814 SNRNP35Q16560 246 aaKnown RBP4.22□□□□□ -1.73
LRIT3-202ENST00000594814 MAPKAPK3Q16644 382 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 BCL7AQ4VC05 210 aa4.22□□□□□ -1.73
LRIT3-202ENST00000594814 AGKQ53H12 422 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms