RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SERPINA7P05543 415 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 ZNF888P0CJ79 500 aaPredicted RBP16.4■□□□□ 0.22
IRF3-208ENST00000594387 SLC35E2BP0CK96 405 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 COX6A1P12074 109 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 SERPINB8P50452 374 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 SERPINB9P50453 376 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 SLBPQ14493 270 aaKnown RBP eCLIP16.4■□□□□ 0.22
IRF3-208ENST00000594387 C18orf21Q32NC0 220 aaPredicted RBP16.4■□□□□ 0.22
IRF3-208ENST00000594387 CRB2Q5IJ48 1285 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 TOR1AIP1Q5JTV8 583 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 TMEM205Q6UW68 189 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 SLCO4C1Q6ZQN7 724 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 CPEB2Q7Z5Q1 589 aaKnown RBP16.4■□□□□ 0.22
IRF3-208ENST00000594387 DNAJB14Q8TBM8 379 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 PTCD3Q96EY7 689 aaKnown RBP16.4■□□□□ 0.22
IRF3-208ENST00000594387 WDR77Q9BQA1 342 aaPredicted RBP16.4■□□□□ 0.22
IRF3-208ENST00000594387 EFCAB11Q9BUY7 163 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 CD244Q9BZW8 370 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 VN1R1Q9GZP7 353 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 EHD1Q9H4M9 534 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 NT5DC2Q9H857 520 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 LUZP4Q9P127 313 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 TEKT2Q9UIF3 430 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 PTBP2Q9UKA9 531 aaKnown RBP16.4■□□□□ 0.22
IRF3-208ENST00000594387 PLAAQ9Y263 795 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 ANGPTL3Q9Y5C1 460 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 LOC102723996A0A087X1L8 192 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 DYTNA2CJ06 578 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 ZNF860A6NHJ4 632 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 TAPBPO15533 448 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 CHST10O43529 356 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 KERAO60938 352 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 JRKO75564 520 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 KRT38O76015 456 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 C2P06681 752 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 MYBL2P10244 700 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 MSH2P43246 934 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 GLRBP48167 497 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 RAB8AP61006 207 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 IRF8Q02556 426 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 TGM3Q08188 693 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 BMPR2Q13873 1038 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 ACAP2Q15057 778 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 NSDHLQ15738 373 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 LGSNQ5TDP6 509 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 LRRC70Q7Z2Q7 622 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 ISCA2Q86U28 154 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 PDSS2Q86YH6 399 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 AFAP1L2Q8N4X5 818 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 ANKRD53Q8N9V6 530 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 UTP15Q8TED0 518 aaKnown RBP16.39■□□□□ 0.21
IRF3-208ENST00000594387 PPP4R1Q8TF05 950 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 UBE2E3Q969T4 207 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 MIB2Q96AX9 1013 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 TBC1D20Q96BZ9 403 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 NXNL1Q96CM4 212 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 TMEM79Q9BSE2 394 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 ZNF700Q9H0M5 742 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 VPS11Q9H270 941 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 SPNS1Q9H2V7 528 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 SNX15Q9NRS6 342 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 OPTCQ9UBM4 332 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 CPAMD8Q8IZJ3 1885 aa16.39■□□□□ 0.21
IRF3-208ENST00000594387 GCN1Q92616 2671 aaKnown RBP16.38■□□□□ 0.21
IRF3-208ENST00000594387 CFAP46Q8IYW2 2715 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 A0A087WUV0 522 aaPredicted RBP16.38■□□□□ 0.21
IRF3-208ENST00000594387 A0A096LPK6 155 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 POC1B-GALNT4F8VUJ3 575 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 CLEC3AO75596 197 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 SORBS2O94875 1100 aaKnown RBP16.38■□□□□ 0.21
IRF3-208ENST00000594387 ZIC2O95409 532 aaPredicted RBP16.38■□□□□ 0.21
IRF3-208ENST00000594387 FHP07954 510 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 PRR35P0CG20 571 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 RNH1P13489 461 aaKnown RBP16.38■□□□□ 0.21
IRF3-208ENST00000594387 GFAPP14136 432 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 CNTFP26441 200 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 CHIT1Q13231 466 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 MFAP5Q13361 173 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 INPP5JQ15735 1006 aaPredicted RBP16.38■□□□□ 0.21
IRF3-208ENST00000594387 PLEKHN1Q494U1 663 aaPredicted RBP16.38■□□□□ 0.21
IRF3-208ENST00000594387 LINC00696Q6ZRV3 163 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 ARMC2Q8NEN0 867 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 RHEBL1Q8TAI7 183 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 KCTD4Q8WVF5 259 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 ESAMQ96AP7 390 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 CNDP1Q96KN2 507 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 SLC6A16Q9GZN6 736 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 PTGFRNQ9P2B2 879 aa16.38■□□□□ 0.21
IRF3-208ENST00000594387 A0A1W2PQ72 361 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 UBXN8O00124 270 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 CDC123O75794 336 aaPredicted RBP16.37■□□□□ 0.21
IRF3-208ENST00000594387 KLHL2O95198 593 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 EPB42P16452 691 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 OLR1P78380 273 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 BTN3A2P78410 334 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 ARG2P78540 354 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 ABRAXAS2Q15018 415 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 PCOLCEQ15113 449 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 EXT1Q16394 746 aa16.37■□□□□ 0.21
IRF3-208ENST00000594387 BTBD16Q32M84 506 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms